Reviewed, UniProtKB/Swiss-Prot Q3M502 (SYGA_ANAVT)

Names and origin

Protein names

Recommended name:
    Glycyl-tRNA synthetase alpha subunit
    EC=6.1.1.14
Alternative name(s):
    Glycine--tRNA ligase alpha subunit
      Short name=GlyRS

Gene names

Name:	glyQ
Ordered Locus Names:	Ava_4336

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254
Subunit structure	Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254
Subcellular location	Cytoplasm HAMAP MF_00254.
Sequence similarities	Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm
Ligand	ATP-binding Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycyl-tRNA aminoacylation Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP glycine-tRNA ligase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 294	294	Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254		PRO_1000047396

Sequences

	Sequence		Length	Mass (Da)
	Q3M502-1 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: 70CD6211C1474F36	FASTA	294	33,945
	10 20 30 40 50 60 MNFQSVIATL HQFWAERGCL IAQPYDIEKG AGTKNPHTFL RALGPEPWAV AYVEPCRRPT 70 80 90 100 110 120 DGRYGENPNR VQHYYQYQVL IKPSPDNIQD IYLDSLRALG IRPEDHDIRF VEDNWEDATV 130 140 150 160 170 180 GAWGTGWEVW LDGMEITQFT YFQQCGGIDC RPVSIEITYG LERLAMYLQE VEAITKIHWT 190 200 210 220 230 240 DDITYGDVFL QNEIEQSTYN FEASNPELLL TLFSLYEQEA TQLTEKGLVL PSLDYVMKCS 250 260 270 280 290 HTFNLLDARG VISVTERTRY IARIRHLARK VANLYVEQRE KLGFPLLKNV PVAQ

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA23934.1.
RefSeq	YP_324829.1.
3D structure databases
HSSP	HSSP built from PDB template 1J5W based on UniProtKB Q9WY59.
SMR	Q3M502. Positions 1-277.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3M502.
Genome annotation databases
GeneID	3680678.
GenomeReviews	Gene locus Ava_4336 in contig CP000117_GR.
KEGG	ava:Ava_4336.
NMPDR	fig|240292.3.peg.4626.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0752.
HOGENOM	HBG285316.
OMA	CRRPTDG.
PhylomeDB	Q3M502.
Enzyme and pathway databases
BioCyc	AVAR240292:AVA_4336-MONOMER.
Family and domain databases
HAMAP	MF_00254. Gly_tRNA_synth_alpha. [Tree]
InterPro	IPR006194. Gly-tRNA-synth_II_heterodimer. IPR002310. Gly-tRNA_synth_IIc_asu. [Graphical view]
Pfam	PF02091. tRNA-synt_2e. 1 hit. [Graphical view]
PRINTS	PR01044. TRNASYNTHGA.
TIGRFAMs	TIGR00388. glyQ. 1 hit.
PROSITE	PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

SYGA_ANAVT

Accession

Primary (citable) accession number: Q3M502

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	October 25, 2005
Last modified:	February 9, 2010
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)