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Reviewed, UniProtKB/Swiss-Prot Q3M4J7 (RPIA_ANAVT)

Last modified February 9, 2010. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI
Gene names
Name: rpiA
Ordered Locus Names: Ava_4491
OrganismAnabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]
Taxonomic identifier240292 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaNostocalesNostocaceaeAnabaena

Protein attributes

Sequence length236 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Ontologies

Keywords
   Molecular functionIsomerase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processpentose-phosphate shunt, non-oxidative branch

Inferred from electronic annotation. Source: HAMAP

   Molecular functionribose-5-phosphate isomerase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 236236Ribose-5-phosphate isomerase A HAMAP MF_00170
PRO_1000016900

Sequences

Sequence LengthMass (Da)Tools
Q3M4J7-1 [UniParc].

Last modified October 25, 2005. Version 1.
Checksum: A0877B492C7F61B9

FASTA23624,931
        10         20         30         40         50         60 
MTVTADPVTL MKQEVGKAAA ALVKSGSIVG LGTGSTTAYT IQYLGDRLKS GELTDIVGIP 

        70         80         90        100        110        120 
TSFQSEVLSK QYGVPLTTLD AVDHIDIAID GADEVDPQKN LIKGGGAAHT REKVVDYLAN 

       130        140        150        160        170        180 
QFIVVVDSGK LVDRLGSVFA VPVEVIPMAI TPVTNAIKQL GGKPELRMGV KKAGPVITDQ 

       190        200        210        220        230 
GNFVLDVRFD SIDDPVNLEK ILNNIPGVLE NGIFVNCADI VLVGEVKDGQ PLVRQL 

« Hide

References

[1]"Complete sequence of Anabaena variabilis ATCC 29413."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000117 Genomic DNA. Translation: ABA24089.1.
RefSeqYP_324984.1.

3D structure databases

SMRQ3M4J7. Positions 10-229.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3M4J7.

Genome annotation databases

GeneID3680192.
GenomeReviewsGene locus Ava_4491 in contig CP000117_GR.
KEGGava:Ava_4491.
NMPDRfig|240292.3.peg.3879.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0120.
HOGENOMHBG515603.
OMANNMIIDC.
PhylomeDBQ3M4J7.

Enzyme and pathway databases

BioCycAVAR240292:AVA_4491-MONOMER.

Family and domain databases

HAMAPMF_00170. Rib_5P_isom_A.
[Tree]
InterProIPR004788. Ribose5P_isomerase_typA.
IPR020672. Ribose5P_isomerase_typA_subgr.
[Graphical view]
PANTHERPTHR11934. RpiA. 1 hit.
PfamPF06026. Rib_5-P_isom_A. 1 hit.
[Graphical view]
TIGRFAMsTIGR00021. rpiA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRPIA_ANAVT
AccessionPrimary (citable) accession number: Q3M4J7
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: October 25, 2005
Last modified: February 9, 2010
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents