Reviewed, UniProtKB/Swiss-Prot Q3M4J7 (RPIA_ANAVT)

Names and origin

Protein names

Recommended name:
    Ribose-5-phosphate isomerase A
    EC=5.3.1.6
Alternative name(s):
    Phosphoriboisomerase A
      Short name=PRI

Gene names

Name:	rpiA
Ordered Locus Names:	Ava_4491

Organism

Anabaena variabilis (strain ATCC 29413 / PCC 7937) [Complete proteome] [HAMAP]

Taxonomic identifier

240292 [NCBI]

Taxonomic lineage

Bacteria › Cyanobacteria › Nostocales › Nostocaceae › Anabaena

Protein attributes

Sequence length	236 AA.
Sequence status	Complete.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family.

Ontologies

Keywords
Molecular function	Isomerase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 236	236	Ribose-5-phosphate isomerase A HAMAP MF_00170		PRO_1000016900

Sequences

	Sequence		Length	Mass (Da)
	Q3M4J7-1 [UniParc]. Last modified October 25, 2005. Version 1. Checksum: A0877B492C7F61B9	FASTA	236	24,931
	10 20 30 40 50 60 MTVTADPVTL MKQEVGKAAA ALVKSGSIVG LGTGSTTAYT IQYLGDRLKS GELTDIVGIP 70 80 90 100 110 120 TSFQSEVLSK QYGVPLTTLD AVDHIDIAID GADEVDPQKN LIKGGGAAHT REKVVDYLAN 130 140 150 160 170 180 QFIVVVDSGK LVDRLGSVFA VPVEVIPMAI TPVTNAIKQL GGKPELRMGV KKAGPVITDQ 190 200 210 220 230 GNFVLDVRFD SIDDPVNLEK ILNNIPGVLE NGIFVNCADI VLVGEVKDGQ PLVRQL

References

[1]

"Complete sequence of Anabaena variabilis ATCC 29413." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Saunders E.H., Schmutz J., Larimer F., Land M., Kyrpides N., Mavrommatis K., Richardson P. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000117 Genomic DNA. Translation: ABA24089.1.
RefSeq	YP_324984.1.
3D structure databases
SMR	Q3M4J7. Positions 10-229.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3M4J7.
Genome annotation databases
GeneID	3680192.
GenomeReviews	Gene locus Ava_4491 in contig CP000117_GR.
KEGG	ava:Ava_4491.
NMPDR	fig|240292.3.peg.3879.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HBG515603.
OMA	NNMIIDC.
PhylomeDB	Q3M4J7.
Enzyme and pathway databases
BioCyc	AVAR240292:AVA_4491-MONOMER.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RPIA_ANAVT

Accession

Primary (citable) accession number: Q3M4J7

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	October 25, 2005
Last modified:	February 9, 2010
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)