Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Alpha-amylase

Gene

amyB

Organism
Roseburia sp. A2-194
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyBImported
OrganismiRoseburia sp. A2-194Imported
Taxonomic identifieri338564 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeRoseburia

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1650 – 1668HelicalSequence analysisAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 44Sequence analysisAdd BLAST44
ChainiPRO_500422793045 – 1674Sequence analysisAdd BLAST1630

Structurei

3D structure databases

ProteinModelPortaliQ3LB10.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini928 – 1310AamyInterPro annotationAdd BLAST383

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR013784. Carb-bd-like_fold.
IPR005323. CBM41_pullulanase.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF03714. PUD. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3LB10-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKLTKSFQK RQSIASRVLC FLLVLAMVVT MVPALGGGNS TVQAAENPTV
60 70 80 90 100
RLYFEKPDDW NIPAFNYWNE SDVEVDNGDA EKVEVWTSQS KPAMLKDEST
110 120 130 140 150
GYYYIDIRTN SISGFQIVNG GTGVGNPAEK KFENCAIIDA INSATSDTSF
160 170 180 190 200
YLLKNDNGMS WYLDKDKNQV LPEKEKAAAH KVIIYFEKPE NWKTPVINLW
210 220 230 240 250
GGDFVLDNQG AGDASIAAWG NQDKPKLAVS EAENIYTVTL TGTTISGFQL
260 270 280 290 300
VDADTGAETQ FDGQSEEVKA INAITTDTSI YYLRDGKGGM KWYKDADKSE
310 320 330 340 350
TLIEYKEAGY VSPEVNGREV TFRVPVEKTG DAASVTVPGG MNGWKQDSSD
360 370 380 390 400
WELKKDETAG MWSGTFTIAP GKYEYKFALN KTWDVSFSDP ANNRVSGTNS
410 420 430 440 450
VLIVPGLADG KADAMKGIET ALPEKLTLWS EDGTSSEAPV TYSLKTANKD
460 470 480 490 500
ITLNGNSIII GKSYTGQIVE LTAKAENGQT SDFVVNVTEK LYTYTIYYYD
510 520 530 540 550
FDKTHMSENA SDLWIWEKNG AGATEGTPFT ATETLSDGNE WLRAEIKLPY
560 570 580 590 600
TDLQIIPRSK DEWKWEKDTI SYSNSAGTEN VTLYIVSNSK QAYTEIPELV
610 620 630 640 650
APRSRYVMIE YDRPAKDYTG WNIYTWNSGF GSDVSVAFAD INGKMVAKIP
660 670 680 690 700
VKDSKADLKL SFCMRHSTAA DEWESKDGGD HYVTIPADQS VVKAVFTQGE
710 720 730 740 750
GITRVLPCNT GFERDGANNA IHFYYRNDEL AAENNLASLE GNVSIVINGQ
760 770 780 790 800
TYAMAYDAEN DRFVYNLTDV STGDYYYYYV VNGKEELDAF NDVTANDSNG
810 820 830 840 850
KECSVCHFKK ANVSVEASLS QYAMDYNDNN VLSVKLTAKD GEGLETSEIA
860 870 880 890 900
AITADLSELG LGKEFAIEPE LMEGTISCLN TVAAGVKNIP VTVKDIYGNV
910 920 930 940 950
YTTATNVTVT ERKKSAGDFD WDEAVIYFAV TDRFFDGDAS NNDAYGVGDY
960 970 980 990 1000
NVGEKGGSSY HGGDFAGLNQ KLDYLKDLGV NTIWITPIVE NITEDQHDNE
1010 1020 1030 1040 1050
TDTATYGYHG YWASDFTKLN KHLGKEQQFK ALLDAAHSKG MKIMVDVVLN
1060 1070 1080 1090 1100
HAGYGREDYF NSILTDADGN SISMIRDSSN TISGDDKYDS LSDLPDFVTE
1110 1120 1130 1140 1150
NKAVTDQLVA WQTEWMSKYN IDYYRVDTVK HVETTTWAAF KNSLTKVNPD
1160 1170 1180 1190 1200
FKMIGEYSGA GYANNAGELG TGTMDALLDF DFNDFAQNFV TGNISSVENS
1210 1220 1230 1240 1250
LQKRNNAINN TSVMGSFLSS HDEDTLQYKL VNESKISEEE AYNLMKVAAT
1260 1270 1280 1290 1300
LQITAKGQPV LYYGEEIGQG GANNWPLQTN RRDFDWTELE KQKADSNSIY
1310 1320 1330 1340 1350
NHYKTMLAIR NAYTDVFARG NRSTVAVSDA DGYEVISRSY GNNTLYVGMN
1360 1370 1380 1390 1400
VKEAEKEVVI PVAESAGTVL KNLYDGKTYT VSADRNVSVT IPAAKDGGTI
1410 1420 1430 1440 1450
VLTAETKTEP APDEKQDDKK TDTAESNGNA QSSGNNANQS TSANKTTPKQ
1460 1470 1480 1490 1500
EEQAVAEVTV QEESFANVIE AVNKAKTGSK IRVNLLKTTK IPANVFESIK
1510 1520 1530 1540 1550
GKDMNVTFKV SDQASWIING KDITGNVTAP IDLGLVVGTS DIPKQKVTAL
1560 1570 1580 1590 1600
ADGNETIQLS LNYDGVFGFE GILRLSVGKD YSGKIANLYY YNETTGKFEY
1610 1620 1630 1640 1650
YQAVQVKEDG TVDFKFSHAS DYVIVLNDTD MSQTTGSVIA SPKTSDNTPI
1660 1670
AAAVILLLFG CALMGTAYRK NKHF
Length:1,674
Mass (Da):184,167
Last modified:November 8, 2005 - v1
Checksum:i17CC2699E5B60CF8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM055811 Genomic DNA. Translation: CAJ20070.1.

Similar proteinsi

Entry informationi

Entry nameiQ3LB10_9FIRM
AccessioniPrimary (citable) accession number: Q3LB10
Entry historyiIntegrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: September 27, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)