Q3KM42 (Q3KM42_CHLTA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Transcription antitermination protein nusG RuleBase RU000538

Gene names

Name:	nusG EMBL AAX50580.1
Ordered Locus Names:	CTA_0342

Organism

Chlamydia trachomatis serovar A (strain HAR-13 / ATCC VR-571B) [Complete proteome] [HAMAP]

Taxonomic identifier

315277 [NCBI]

Taxonomic lineage

Bacteria › Chlamydiae › Chlamydiales › Chlamydiaceae › Chlamydia/Chlamydophila group › Chlamydia

Protein attributes

Sequence length	182 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase By similarity. SAAS SAAS006645 RuleBase RU000538
Sequence similarities	Belongs to the nusG family. RuleBase RU003559

Ontologies

Keywords
Biological process	Transcription Transcription antitermination SAAS SAAS006645 RuleBase RU000538 Transcription regulation Transcription termination SAAS SAAS006645 RuleBase RU000538
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	positive regulation of transcription elongation from RNA polymerase II promoter Inferred from electronic annotation. Source: InterPro transcription antitermination Inferred from electronic annotation. Source: UniProtKB-KW transcription termination, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3KM42 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: E397E0456989B86A	FASTA	182	20,746
	10 20 30 40 50 60 MFKWYVVQVF TAQEKKVKKS LEDFKEASGM SDFIQQIILP SENVMEVKKG EHKIVEKYIW 70 80 90 100 110 120 PGYLLVKMHL TDESWSYVKK TQGVVEFLGG GAPVALSEEE VKNILADLEE KKSGVVQKHK 130 140 150 160 170 180 FEVGSQVKIN DGVFVNFVGV VSEVFHDKGR LSVMVSIFGR ETRVDDLEFW QVEEVVPGQE SE

References

[1]	"Comparative genomic analysis of Chlamydia trachomatis oculotropic and genitotropic strains." Carlson J.H., Porcella S.F., McClarty G., Caldwell H.D. Infect. Immun. 73:6407-6418(2005) [PubMed: 16177312] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000051 Genomic DNA. Translation: AAX50580.1.
RefSeq	YP_328128.1. NC_007429.1.
3D structure databases
ProteinModelPortal	Q3KM42.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3KM42.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3687763.
GenomeReviews	Gene locus CTA_0342 in contig CP000051_GR.
KEGG	cta:CTA_0342.
PATRIC	32022564. VBIChlTra31516_0352.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0250.
HOGENOM	HBG751162.
OMA	VASGCEK.
PhylomeDB	Q3KM42.
ProtClustDB	PRK05609.
Family and domain databases
InterPro	IPR005824. KOW. IPR001062. Transcrpt_antiterm_NusG. IPR006645. Transcrpt_antiterm_NusG_N. IPR014722. Transl_SH3-like_sub. IPR008991. Translation_prot_SH3-like. [Graphical view]
Gene3D	G3DSA:2.30.30.30. Ribosomal_L2. 1 hit. G3DSA:3.30.70.940. Transcrpt_antiterm_NusG_N. 1 hit.
KO	K02601.
Pfam	PF02357. NusG. 1 hit. [Graphical view]
PRINTS	PR00338. NUSGTNSCPFCT.
SMART	SM00739. KOW. 1 hit. SM00738. NGN. 1 hit. [Graphical view]
SUPFAM	SSF82679. Transcrpt_antiterm_NusG_N. 1 hit. SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR00922. NusG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3KM42_CHLTA

Accession

Primary (citable) accession number: Q3KM42

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)