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Q3KH02

- Q3KH02_PSEPF

UniProt

Q3KH02 - Q3KH02_PSEPF

Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

Pfl01_1211

Organism
Pseudomonas fluorescens (strain Pf0-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPFLU205922:GJBD-1232-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Pfl01_1211Imported
    OrganismiPseudomonas fluorescens (strain Pf0-1)Imported
    Taxonomic identifieri205922 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000002704: Chromosome

    PTM / Processingi

    PTM databases

    PhosSiteiP0906716.

    Interactioni

    Protein-protein interaction databases

    STRINGi205922.Pfl01_1211.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3KH02.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3KH02-1 [UniParc]FASTAAdd to Basket

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    MKDFAGLYAE LDATTSSNAK LAAMQTYFAQ AQPQDAAWAV YFLSGGRPRQ    50
    LVPVRILRDL AVEMSGLAPW LFEESYQAVG DLAETISLVL PEHPYTSEAG 100
    LAEWIEDKLL PLRGETPEYL AHQLPALWAQ LDRPSLMLCI KLITGSFRVG 150
    VSKLLVTRAL ASMAGLDSKR VAQRLVGYTD LSNRPNAASY LKLIAPESSD 200
    EHAQRGGQPY PFFLAHALAQ PVETFEALLG PASNWQVEWK WDGIRAQVVK 250
    RDGKLWVWSR GEELVTERFP ELDTLVHGLP DGTVIDGEIV VWKNRRPVTE 300
    DAFDPQSTEA PAVQPFALLQ QRIGRKSLDR KILEDAPVVV LAYDLLEWQG 350
    EDWRNQPQAR RREQLEQVIA RCNNPVLLPS PILTGDDWFD LARQREASRR 400
    LGVEGMMLKA RDAMYGVGRT KDMGVWWKWK VDPFSVDAVL IYAQRGHGRR 450
    ASLYSDYTFA VWDGPPGASA RALVPFAKAY SGLTDAEMRE VDSIVRKTTV 500
    EKFGPVSSVK PSLVFELGFE GIALSRRHKS GIAVRFPRML RWRQDKTVDE 550
    ADSLATLQNL LV 562
    Length:562
    Mass (Da):63,023
    Last modified:November 8, 2005 - v1
    Checksum:i8DC12395486434D8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000094 Genomic DNA. Translation: ABA72954.1.
    RefSeqiWP_011332770.1. NC_007492.2.
    YP_346943.1. NC_007492.2.

    Genome annotation databases

    EnsemblBacteriaiABA72954; ABA72954; Pfl01_1211.
    GeneIDi3717060.
    KEGGipfo:Pfl01_1211.
    PATRICi19884515. VBIPseFlu44242_1232.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000094 Genomic DNA. Translation: ABA72954.1 .
    RefSeqi WP_011332770.1. NC_007492.2.
    YP_346943.1. NC_007492.2.

    3D structure databases

    ProteinModelPortali Q3KH02.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 205922.Pfl01_1211.

    PTM databases

    PhosSitei P0906716.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA72954 ; ABA72954 ; Pfl01_1211 .
    GeneIDi 3717060.
    KEGGi pfo:Pfl01_1211.
    PATRICi 19884515. VBIPseFlu44242_1232.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci PFLU205922:GJBD-1232-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Pf0-1Imported.

    Entry informationi

    Entry nameiQ3KH02_PSEPF
    AccessioniPrimary (citable) accession number: Q3KH02
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3