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Q3KH02

- Q3KH02_PSEPF

UniProt

Q3KH02 - Q3KH02_PSEPF

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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

Pfl01_1211

Organism
Pseudomonas fluorescens (strain Pf0-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPFLU205922:GJBD-1232-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Pfl01_1211Imported
OrganismiPseudomonas fluorescens (strain Pf0-1)Imported
Taxonomic identifieri205922 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002704: Chromosome

PTM / Processingi

PTM databases

PhosSiteiP0906716.

Interactioni

Protein-protein interaction databases

STRINGi205922.Pfl01_1211.

Structurei

3D structure databases

ProteinModelPortaliQ3KH02.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3KH02-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKDFAGLYAE LDATTSSNAK LAAMQTYFAQ AQPQDAAWAV YFLSGGRPRQ
60 70 80 90 100
LVPVRILRDL AVEMSGLAPW LFEESYQAVG DLAETISLVL PEHPYTSEAG
110 120 130 140 150
LAEWIEDKLL PLRGETPEYL AHQLPALWAQ LDRPSLMLCI KLITGSFRVG
160 170 180 190 200
VSKLLVTRAL ASMAGLDSKR VAQRLVGYTD LSNRPNAASY LKLIAPESSD
210 220 230 240 250
EHAQRGGQPY PFFLAHALAQ PVETFEALLG PASNWQVEWK WDGIRAQVVK
260 270 280 290 300
RDGKLWVWSR GEELVTERFP ELDTLVHGLP DGTVIDGEIV VWKNRRPVTE
310 320 330 340 350
DAFDPQSTEA PAVQPFALLQ QRIGRKSLDR KILEDAPVVV LAYDLLEWQG
360 370 380 390 400
EDWRNQPQAR RREQLEQVIA RCNNPVLLPS PILTGDDWFD LARQREASRR
410 420 430 440 450
LGVEGMMLKA RDAMYGVGRT KDMGVWWKWK VDPFSVDAVL IYAQRGHGRR
460 470 480 490 500
ASLYSDYTFA VWDGPPGASA RALVPFAKAY SGLTDAEMRE VDSIVRKTTV
510 520 530 540 550
EKFGPVSSVK PSLVFELGFE GIALSRRHKS GIAVRFPRML RWRQDKTVDE
560
ADSLATLQNL LV
Length:562
Mass (Da):63,023
Last modified:November 8, 2005 - v1
Checksum:i8DC12395486434D8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000094 Genomic DNA. Translation: ABA72954.1.
RefSeqiWP_011332770.1. NC_007492.2.
YP_346943.1. NC_007492.2.

Genome annotation databases

EnsemblBacteriaiABA72954; ABA72954; Pfl01_1211.
GeneIDi3717060.
KEGGipfo:Pfl01_1211.
PATRICi19884515. VBIPseFlu44242_1232.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000094 Genomic DNA. Translation: ABA72954.1 .
RefSeqi WP_011332770.1. NC_007492.2.
YP_346943.1. NC_007492.2.

3D structure databases

ProteinModelPortali Q3KH02.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 205922.Pfl01_1211.

PTM databases

PhosSitei P0906716.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA72954 ; ABA72954 ; Pfl01_1211 .
GeneIDi 3717060.
KEGGi pfo:Pfl01_1211.
PATRICi 19884515. VBIPseFlu44242_1232.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci PFLU205922:GJBD-1232-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Pf0-1Imported.

Entry informationi

Entry nameiQ3KH02_PSEPF
AccessioniPrimary (citable) accession number: Q3KH02
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: October 1, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3