Q3KF90 (Q3KF90_PSEPF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative cytochrome C oxidase subunit EMBL ABA73566.1

Gene names

Ordered Locus Names:

Pfl01_1823

Organism

Pseudomonas fluorescens (strain Pf0-1) [Complete proteome] [HAMAP] EMBL ABA73566.1

Taxonomic identifier

205922 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas fluorescens group › Pseudomonas fluorescens

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the heme-copper respiratory oxidase family. RuleBase RU000370

Ontologies

Keywords
Biological process	Electron transport Respiratory chain RuleBase RU000370 Transport
Cellular component	Membrane
Domain	Transmembrane RuleBase RU000370
Ligand	Heme RuleBase RU000370 Iron Metal-binding
Molecular function	Oxidoreductase RuleBase RU000370
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	aerobic respiration Inferred from electronic annotation. Source: InterPro electron transport chain Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane respiratory chain complex IV Inferred from electronic annotation. Source: InterPro
Molecular_function	cytochrome-c oxidase activity Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro heme binding Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3KF90 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 83FFE7DF4875DF7C	FASTA	480	53,447
	10 20 30 40 50 60 MSTAISPTAY NYKVVRQFAI MTVVWGILGM GLGVFIASQL VWPELNFGLP WTSFGRLRPL 70 80 90 100 110 120 HTNLVIFAFG GCALFATSYY VVQRTCQTRL ISDSLAAFTF WGWQAVIVGA IITLPLGYTT 130 140 150 160 170 180 TKEYAELEWP LAILLAIVWV TYGLVFFGTI TKRKTKHIYV GNWFYGAFIV VTAMLHIVNH 190 200 210 220 230 240 MSLPVSLFKS YSAYSGATDA MIQWWYGHNA VGFFLTTGFL GMMYYFVPKQ AERPIYSYRL 250 260 270 280 290 300 SIVHFWALIT LYIWAGPHHL HYTALPDWAQ SLGMAMSIIL LAPSWGGMIN GMMTLSGAWH 310 320 330 340 350 360 KLRTDPILRF LVVSLAFYGM STFEGPMMAI KTVNSLSHYT DWTIGHVHAG ALGWVAMISI 370 380 390 400 410 420 GAIYHMIPKL FGRAQMHSTG LINAHFWLAT IGTVLYIASM WVNGITQGLM WRAINDDGTL 430 440 450 460 470 480 TYSFVEALQA SHPGYIVRAL GGAFFASGMF LMAYNVWRTV RASDPAEAEA AAKIAVVGAH

References

[1]

"Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens." Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.X., Moon C.D., Gehrig S.M., Godfrey S.A., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. , Seeger K., Murphy L., Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M., Parkhill J., Levy S.B., Rainey P.B., Thomson N.R. Genome Biol. 10:R51-R51(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pf0-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000094 Genomic DNA. Translation: ABA73566.1.
RefSeq	YP_347555.1. NC_007492.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	205922.Pfl01_1823.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABA73566; ABA73566; Pfl01_1823.
GeneID	3716429.
KEGG	pfo:Pfl01_1823.
PATRIC	19885775. VBIPseFlu44242_1856.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3278.
HOGENOM	HOG000277908.
KO	K00404.
OMA	LMWRATQ.
ProtClustDB	PRK14488.
Enzyme and pathway databases
BioCyc	PFLU205922:GJBD-1852-MONOMER.
Family and domain databases
Gene3D	1.20.210.10. 1 hit.
InterPro	IPR000883. Cyt_c_Oxase_su1. IPR023615. Cyt_c_Oxase_su1_BS. IPR023616. Cyt_c_Oxase_su1_dom. IPR004677. Cyt_c_oxidase_cbb3_su1. [Graphical view]
PANTHER	PTHR10422. PTHR10422. 1 hit.
Pfam	PF00115. COX1. 1 hit. [Graphical view]
SUPFAM	SSF81442. COX1. 1 hit.
TIGRFAMs	TIGR00780. ccoN. 1 hit.
PROSITE	PS50855. COX1. 1 hit. PS00077. COX1_CUB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3KF90_PSEPF

Accession

Primary (citable) accession number: Q3KF90

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)