Q3KF45 (Q3KF45_PSEPF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative exodeoxyribonuclease EMBL ABA73611.1
EC=3.1.11.2 EMBL ABA73611.1

Gene names

Name:	exoA EMBL ABA73611.1
Ordered Locus Names:	Pfl01_1868

Organism

Pseudomonas fluorescens (strain Pf0-1) [Complete proteome] [HAMAP] EMBL ABA73611.1

Taxonomic identifier

205922 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas fluorescens group › Pseudomonas fluorescens

Protein attributes

Sequence length	264 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABA73611.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro endonuclease activity Inferred from electronic annotation. Source: InterPro exodeoxyribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3KF45 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 3235FBFFA7488D15	FASTA	264	30,534
	10 20 30 40 50 60 MKKMRIATFN VNGLRARLPN LLEWLRREQP DIVCLQELKM LDSAFPAADL EAAGYGAIWH 70 80 90 100 110 120 GQASWNGVAI LARDAQPLES RRGLPGDPDD KHSRYLEAAV HGVLVGCLYL PNGNPQPGPK 130 140 150 160 170 180 FDYKLAWFER LIKYARDLQS SDHPVVLAGD YNVVPTDLDI YNTRSWLKDA LLQPESRECY 190 200 210 220 230 240 QRLLDQGWTD SLRHLYPEDR LYTFWDYFRQ HWQKNSGLRI DHLLLNPTLS PYLHEAGVDA 250 260 WVRNEPHASD HAPTWIRIGS RKRR

References

[1]

"Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens." Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.X., Moon C.D., Gehrig S.M., Godfrey S.A., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. , Seeger K., Murphy L., Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M., Parkhill J., Levy S.B., Rainey P.B., Thomson N.R. Genome Biol. 10:R51-R51(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pf0-1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000094 Genomic DNA. Translation: ABA73611.1.
RefSeq	YP_347600.1. NC_007492.2.
3D structure databases
ProteinModelPortal	Q3KF45.
ModBase	Search...
Protein-protein interaction databases
STRING	205922.Pfl01_1868.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABA73611; ABA73611; Pfl01_1868.
GeneID	3716382.
KEGG	pfo:Pfl01_1868.
PATRIC	19885869. VBIPseFlu44242_1903.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0708.
HOGENOM	HOG000034587.
KO	K01142.
OMA	TAYAYTF.
ProtClustDB	CLSK868500.
Enzyme and pathway databases
BioCyc	PFLU205922:GJBD-1897-MONOMER.
Family and domain databases
InterPro	IPR020847. AP_endonuclease_F1_BS. IPR005135. Endo/exonuclease/phosphatase. IPR004808. ExoDNase_III. [Graphical view]
PANTHER	PTHR22748. PTHR22748. 1 hit.
Pfam	PF03372. Exo_endo_phos. 1 hit. [Graphical view]
SUPFAM	SSF56219. Exo_endo_phos. 1 hit.
TIGRFAMs	TIGR00633. xth. 1 hit.
PROSITE	PS00726. AP_NUCLEASE_F1_1. 1 hit. PS51435. AP_NUCLEASE_F1_4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3KF45_PSEPF

Accession

Primary (citable) accession number: Q3KF45

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)