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Q3KEG6 (Q3KEG6_PSEPF) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 70. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Pfl01_2097 EMBL ABA73840.1
OrganismPseudomonas fluorescens (strain Pf0-1) [Complete proteome] [HAMAP] EMBL ABA73840.1
Taxonomic identifier205922 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length848 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABA73840.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3KEG6 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: BC79862D27B7308E

FASTA84894,072
        10         20         30         40         50         60 
MSRNLDDYNR MRDFSATSEP AAGHRRGKKP AGDHALQFCI QKHDASHLHY DFRLELDGAL 

        70         80         90        100        110        120 
KSWAVPKGPS LDPKVKRLAV HVEDHPLDYA TFEGSIPEGH YGAGDVIVWD RGVWIPLEDP 

       130        140        150        160        170        180 
EKAYAKGKLK FELQGEKLAG VWNLVRTHMP GKKEQWFLIK HQDGAARPQS DYDVLVAEPD 

       190        200        210        220        230        240 
SVLSERTIVD KPRLSAKQVK PLQGPAKAPR KSASGKLTGA HKAKIPAQLK PQLATLVESA 

       250        260        270        280        290        300 
PEGDWQYEIK FDGYRIMARI DQDEVQLFTR NGHDWTHKLP KQAQALAALG LESAWLDGEM 

       310        320        330        340        350        360 
VVADADGVPD FQALQNAFDS GRSENIVYYL FDLPYLNGVD LREVAVEERR AALATVLKTH 

       370        380        390        400        410        420 
QDPLLRFSEA FDETPQALLN SACQMRMEGL IGKRLGSPYV SRRSSDWIKL KCKHRQEFVI 

       430        440        450        460        470        480 
VGYTDPKGAR SSFGALLLGL HDRDSGELRY AGKVGTGFNE TTLKSILAQL KPLRVKKPAV 

       490        500        510        520        530        540 
ANPPTGFEAK GVHWLKPSLL AEVAFAEMTQ DGSVRHAVFH GLREDKPAKD ITEERAKPMN 

       550        560        570        580        590        600 
TSKTESTAPS QSGLADGKVR ITHPDRVIDA SSGTTKMQLA EYYASVAEWI LPQLKDRPVA 

       610        620        630        640        650        660 
LVRAPDGIAG DLFFQKNAEH LAIPGIRTLD KELTGQPVML INNAEALIGA VQMSTVELHT 

       670        680        690        700        710        720 
WNATTTDLDK PDRFVLDLDP DPALPWKSMI EATALTLTVL DELGLKAFLK TSGGKGIHLV 

       730        740        750        760        770        780 
VPLTRKHGWD EVKDFSHAIV THMAKLLPER FSAVSGPKNR VGRIFIDYLR NGLGATTICA 

       790        800        810        820        830        840 
YAARTREGLP VSVPLFREEV GEIKGADQWN VHNVHERLAE VGDEPWADIK KTRQSITAEM 


RKRVGMKK 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000094 Genomic DNA. Translation: ABA73840.1.
RefSeqYP_347829.1. NC_007492.2.

3D structure databases

ProteinModelPortalQ3KEG6.
SMRQ3KEG6. Positions 555-844.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING205922.Pfl01_2097.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA73840; ABA73840; Pfl01_2097.
GeneID3715990.
KEGGpfo:Pfl01_2097.
PATRIC19886345. VBIPseFlu44242_2131.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBPRK05972.

Enzyme and pathway databases

BioCycPFLU205922:GJBD-2136-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3KEG6_PSEPF
AccessionPrimary (citable) accession number: Q3KEG6
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: April 16, 2014
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)