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Protein
Submitted name:

Putative ABC transport system, membrane protein

Gene

potB

Organism
Pseudomonas fluorescens (strain Pf0-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciPFLU205922:GJBD-3191-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ABC transport system, membrane proteinImported
Gene namesi
Name:potBImported
Ordered Locus Names:Pfl01_3143Imported
OrganismiPseudomonas fluorescens (strain Pf0-1)Imported
Taxonomic identifieri205922 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002704 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3726HelicalUniRule annotationAdd
BLAST
Transmembranei86 – 10722HelicalUniRule annotationAdd
BLAST
Transmembranei119 – 14022HelicalUniRule annotationAdd
BLAST
Transmembranei168 – 18720HelicalUniRule annotationAdd
BLAST
Transmembranei223 – 24725HelicalUniRule annotationAdd
BLAST
Transmembranei267 – 29125HelicalUniRule annotationAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi205922.Pfl01_3143.

Structurei

3D structure databases

ProteinModelPortaliQ3KBH3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini82 – 288207ABC transmembrane type-1InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation
Contains 1 ABC transmembrane type-1 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiCOG1176. LUCA.
HOGENOMiHOG000263581.
KOiK11071.
OMAiGQGRNWP.
OrthoDBiPOG091H04PB.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3KBH3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVSSTSPSL NRVLLLSPVV LTLLALIAIP LGIMGYISLL PRNTYGGVDW
60 70 80 90 100
QAQWQLQSYV QLFFQEGFDG ELELNWVYAQ ALLRSVFQAS GTTVLCFLFG
110 120 130 140 150
FPVALWMSSL TPRRRNLMVL LITIPFWTNL LIRNYAWLII LREQGWVAQS
160 170 180 190 200
LNALFPSAGG ITLLYNDFAV SVGLVYSFLP FMILPIYSTL EKLDWRLVEA
210 220 230 240 250
AYDLGANRWH ALRRIILPLS MPGVIAGALL VFVPSLGAFI TPAILGGGKT
260 270 280 290 300
LMIGNLIQQQ FGTARNWPLG SSLSFLLLGI LLLSLVLYAL YSRSAMKNLN

RGAKA
Length:305
Mass (Da):33,804
Last modified:November 8, 2005 - v1
Checksum:iCAECD314D5B9F3F2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000094 Genomic DNA. Translation: ABA74881.1.
RefSeqiWP_011334527.1. NC_007492.2.

Genome annotation databases

EnsemblBacteriaiABA74881; ABA74881; Pfl01_3143.
KEGGipfo:Pfl01_3143.
PATRICi19888433. VBIPseFlu44242_3166.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000094 Genomic DNA. Translation: ABA74881.1.
RefSeqiWP_011334527.1. NC_007492.2.

3D structure databases

ProteinModelPortaliQ3KBH3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205922.Pfl01_3143.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA74881; ABA74881; Pfl01_3143.
KEGGipfo:Pfl01_3143.
PATRICi19888433. VBIPseFlu44242_3166.

Phylogenomic databases

eggNOGiCOG1176. LUCA.
HOGENOMiHOG000263581.
KOiK11071.
OMAiGQGRNWP.
OrthoDBiPOG091H04PB.

Enzyme and pathway databases

BioCyciPFLU205922:GJBD-3191-MONOMER.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ3KBH3_PSEPF
AccessioniPrimary (citable) accession number: Q3KBH3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: September 7, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.