Q3K7K0 (ASSY_PSEPF) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 61.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Argininosuccinate synthase EC=6.3.4.5 Alternative name(s): Citrulline--aspartate ligase | ||||
| Gene names |
| ||||
| Organism | Pseudomonas fluorescens (strain Pf0-1) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 205922 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › ![]() |
Protein attributes
| Sequence length | 405 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Catalytic activity | ATP + L-citrulline + L-aspartate = AMP + diphosphate + N(omega)-(L-arginino)succinate. HAMAP-Rule MF_00005 |
| Pathway | Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3. HAMAP-Rule MF_00005 |
| Subunit structure | Homotetramer By similarity. |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the argininosuccinate synthase family. Type 1 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Arginine biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Ligase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | arginine biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP argininosuccinate synthase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 405 | 405 | Argininosuccinate synthase HAMAP-Rule MF_00005 | PRO_0000263955 | |||||
Regions | |||||||||
| Nucleotide binding | 10 – 18 | 9 | ATP By similarity | ||||||
Sites | |||||||||
| Binding site | 37 | 1 | ATP; via amide nitrogen and carbonyl oxygen By similarity | ||||||
| Binding site | 88 | 1 | Citrulline By similarity | ||||||
| Binding site | 93 | 1 | Citrulline By similarity | ||||||
| Binding site | 118 | 1 | ATP; via amide nitrogen By similarity | ||||||
| Binding site | 120 | 1 | Aspartate By similarity | ||||||
| Binding site | 124 | 1 | Aspartate By similarity | ||||||
| Binding site | 124 | 1 | Citrulline By similarity | ||||||
| Binding site | 125 | 1 | Aspartate By similarity | ||||||
| Binding site | 128 | 1 | Citrulline By similarity | ||||||
| Binding site | 179 | 1 | Citrulline By similarity | ||||||
| Binding site | 188 | 1 | Citrulline By similarity | ||||||
| Binding site | 264 | 1 | Citrulline By similarity | ||||||
| Binding site | 276 | 1 | Citrulline By similarity | ||||||
Sequences
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References
| [1] | "Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens." Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.-X., Moon C.D., Gehrig S.M., Godfrey S.A.C., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. Thomson N.R.Genome Biol. 10:R51.1-R51.16(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Pf0-1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000094 Genomic DNA. Translation: ABA76254.1. |
| RefSeq | YP_350245.1. NC_007492.2. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1VL2 based on UniProtKB Q9X2A1. |
| ProteinModelPortal | Q3K7K0. |
| SMR | Q3K7K0. Positions 6-398. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 205922.Pfl01_4517. |
2D gel databases | |
| World-2DPAGE | 0008:Q3K7K0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ABA76254; ABA76254; Pfl01_4517. |
| GeneID | 3717886. |
| KEGG | pfo:Pfl01_4517. |
| PATRIC | 19891192. VBIPseFlu44242_4523. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0137. |
| HOGENOM | HOG000230093. |
| KO | K01940. |
| OMA | IYNGYWW. |
| ProtClustDB | PRK00509. |
Enzyme and pathway databases | |
| BioCyc | PFLU205922:GJBD-4583-MONOMER. |
| UniPathway | UPA00068; UER00113. |
Family and domain databases | |
| Gene3D | 3.40.50.620. 1 hit. 3.90.1260.10. 1 hit. |
| HAMAP | MF_00005. Arg_succ_synth_type1. |
| InterPro | IPR001518. Arginosuc_synth. IPR018223. Arginosuc_synth_CS. IPR023434. Arginosuc_synth_type_1_subfam. IPR024074. AS_cat/multimer_dom_body. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view] |
| PANTHER | PTHR11587. PTHR11587. 1 hit. |
| Pfam | PF00764. Arginosuc_synth. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00032. argG. 1 hit. |
| PROSITE | PS00564. ARGININOSUCCIN_SYN_1. 1 hit. PS00565. ARGININOSUCCIN_SYN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ASSY_PSEPF | ||||||||
| Accession | Primary (citable) accession number: Q3K7K0 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
