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Q3K5N8 (Q3K5N8_PSEPF) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Pfl01_5179 EMBL ABA76916.1
OrganismPseudomonas fluorescens (strain Pf0-1) [Complete proteome] [HAMAP] EMBL ABA76916.1
Taxonomic identifier205922 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length633 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region432 – 4343Phosphate binding PDB 4ALF
Region602 – 6043Chloride 2 binding PDB 3ZWU PDB 4AMF

Sites

Metal binding1371Iron oxide (2Fe-O) PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding2261Iron oxide (2Fe-O) PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding2411Iron oxide (2Fe-O) PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding3201Calcium 1 PDB 3ZWU PDB 4A9V PDB 4ALF PDB 4AMF
Metal binding3201Calcium 2 PDB 4A9X
Metal binding3201Iron oxide (2Fe-O) PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding3391Iron oxide (2Fe-O) PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding4341Calcium 1 PDB 3ZWU PDB 4A9V PDB 4ALF PDB 4AMF
Metal binding4341Calcium 2 PDB 4A9X
Metal binding4341Calcium 3 PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding4341Iron oxide (2Fe-O) PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding5261Calcium 1 PDB 3ZWU PDB 4A9V PDB 4ALF PDB 4AMF
Metal binding5261Calcium 2 PDB 4A9X
Metal binding5261Calcium 3 PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding5411Calcium 3 PDB 3ZWU PDB 4A9V PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding5411Calcium 4 PDB 3ZWU PDB 4A9X PDB 4ALF PDB 4AMF
Metal binding5791Calcium 4 PDB 3ZWU PDB 4A9X PDB 4ALF PDB 4AMF
Binding site1371Phosphate PDB 4ALF
Binding site2411Phosphate PDB 4ALF
Binding site3391Phosphate PDB 4ALF
Binding site3911Chloride 1 PDB 3ZWU PDB 4A9V PDB 4AMF
Binding site5261Phosphate PDB 4ALF
Binding site5411Phosphate PDB 4ALF

Sequences

Sequence LengthMass (Da)Tools
Q3K5N8 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: DFA3213C6A35BFE4

FASTA63368,623
        10         20         30         40         50         60 
MSLLEENQST DLEKMVGLSR RGFISAGALC GAAMFLGGNL LSRSVLAASV SAGNSRLLGF 

        70         80         90        100        110        120 
DSIPAATTDT ISLPKGYKSS VLISWGQPLH KNGPAFDPSG NGTAAAQEVQ FGDNNDGMSL 

       130        140        150        160        170        180 
FEFPGEKNRA LMAINNEYTN YRYLYPHGGM PQSAEDVRKA LACEGVSVIE VQRKNGQWQF 

       190        200        210        220        230        240 
VQGSRYNRRI HGNSPLRISG PAAGHELMKT SADKHGKKVL GTFQNCANGK TPWGTYLTCE 

       250        260        270        280        290        300 
ENFTDCFGSS NAQQQFDPAQ KRYGVSAASR EINWHPFDPR FDMAKNPNEL NRHGWVVEID 

       310        320        330        340        350        360 
PFDPQSTPVK RTALGRFKHE NAALAETDDG RAVVYMGDDE RGEFIYKFVS RDKINHRNAK 

       370        380        390        400        410        420 
ANRDILDHGT LYVARFDAGD GNPDHPKGQG QWIELTHGKN GIDASSGFAD QAEVLIHARL 

       430        440        450        460        470        480 
AASVVGATRM DRPEWIVVSP KDGQVYCTLT NNAKRGEDGQ PVGGPNPREK NVYGQILRWR 

       490        500        510        520        530        540 
TDRDDHASKT FAWDLFVVAG NPSVHAGTPK GGSSNITPQN MFNSPDGLGF DKAGRLWILT 

       550        560        570        580        590        600 
DGDSSNAGDF AGMGNNQMLC ADPATGEIRR FMVGPIGCEV TGISFSPDQK TLFVGIQHPG 

       610        620        630 
ENGGSTFPEH LPNGKPRSSV MAITREDGGI VGA 

« Hide

References

« Hide 'large scale' references
[1]"Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens."
Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.X., Moon C.D., Gehrig S.M., Godfrey S.A., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. expand/collapse author list , Seeger K., Murphy L., Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M., Parkhill J., Levy S.B., Rainey P.B., Thomson N.R.
Genome Biol. 10:R51.1-R51.16(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Pf0-1 EMBL ABA76916.1.
[2]"Recycling Phosphorus: Structure and Mechanism of an Iron-and Calcium-Dependent Alkaline Phosphatase."
Yong S.C., Roversi P., Lillington J.E.D., Zeldin O.B., Garman E.F., Lea S.M., Berks B.C.
Submitted (AUG-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.39 ANGSTROMS) OF 48-633 IN COMPLEX WITH CALCIUM; CHLORIDE AND IRON OXIDE (2FE-O).
[3]"Reclycing Phosphorus: Structure and Mechanism of an Iron-and Calcium-Dependent Alkaline Phosphatase."
Yong S.C., Roversi P., Lillington J.E.D., Zeldin O.B., Garman E.F., Lea S.M., Berks B.C.
Submitted (NOV-2011) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.79 ANGSTROMS) OF 48-633 IN COMPLEX WITH CALCIUM AND IRON OXIDE (2FE-O).
[4]"Reclycing Phosphorus: Structure and Mechanism of an Iron-and Calcium-Dependent Alkaline Phosphatase."
Yong S.C., Roversi P., Lillington J.E.D., Zeldin O.B., Garman E.F., Lea S.M., Berks B.C.
Submitted (MAR-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (1.52 ANGSTROMS) OF 55-633 IN COMPLEX WITH CALCIUM; CHLORIDE AND IRON OXIDE (2FE-O).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000094 Genomic DNA. Translation: ABA76916.1.
RefSeqYP_350907.1. NC_007492.2.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZWUX-ray1.39A/B48-633[»]
4A9VX-ray1.10A48-633[»]
4A9XX-ray1.79A48-633[»]
4ALFX-ray1.25A/B48-633[»]
4AMFX-ray1.52A/B55-633[»]
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING205922.Pfl01_5179.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA76916; ABA76916; Pfl01_5179.
GeneID3716769.
KEGGpfo:Pfl01_5179.
PATRIC19892578. VBIPseFlu44242_5194.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3211.
HOGENOMHOG000249502.
KOK07093.
OMATCEENWP.
OrthoDBEOG66HVB8.
ProtClustDBCLSK869463.

Enzyme and pathway databases

BioCycPFLU205922:GJBD-5268-MONOMER.

Family and domain databases

Gene3D2.120.10.30. 3 hits.
InterProIPR011042. 6-blade_b-propeller_TolB-like.
IPR008557. DUF839.
IPR006311. TAT_signal.
[Graphical view]
PfamPF05787. DUF839. 1 hit.
[Graphical view]
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3K5N8_PSEPF
AccessionPrimary (citable) accession number: Q3K5N8
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: April 16, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)