Q3K5G1 (Q3K5G1_PSEPF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alginate lyase EMBL ABA76993.1

Gene names

Ordered Locus Names:

Pfl01_5256

Organism

Pseudomonas fluorescens (strain Pf0-1) [Complete proteome] [HAMAP] EMBL ABA76993.1

Taxonomic identifier

205922 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	222 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABA76993.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3K5G1 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: FF95F876AA377B9E	FASTA	222	25,013
	10 20 30 40 50 60 MIDLATWNLS VPVGSPPYTV ETSKLVNGFK DQYFHSDTGT LFFWSPVTGS KTENAIYPRT 70 80 90 100 110 120 ELRETYSNGT LRNWYYPDAD NLLRATLSVN KVPSSGKIVI GQIHAYESQK PMLKLEYQYK 130 140 150 160 170 180 EKTETGNLVI KLRTHPDQDE SRVITLATGI KLNREFNYLI HLSPGGALGV SAAGYQWDSQ 190 200 210 220 ISATWRNKPL YFKAGVYVQD NTGYTSEGGQ VTFSKLDIDH DK

References

[1]

"Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens." Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.-X., Moon C.D., Gehrig S.M., Godfrey S.A.C., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. , Seeger K., Murphy L., Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M., Parkhill J., Levy S.B., Rainey P.B., Thomson N.R. Genome Biol. 10:R51.1-R51.16(2009) [PubMed: 19432983] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000094 Genomic DNA. Translation: ABA76993.1.
RefSeq	YP_350984.1. NC_007492.2.
3D structure databases
ProteinModelPortal	Q3K5G1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3K5G1.
Protein family/group databases
CAZy	PL7. Polysaccharide Lyase Family 7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3715766.
GenomeReviews	Gene locus Pfl01_5256 in contig CP000094_GR.
KEGG	pfo:Pfl01_5256.
PATRIC	19892732. VBIPseFlu44242_5271.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG46864.
HOGENOM	HBG638857.
OMA	NTGYTSE.
ProtClustDB	CLSK866376.
Enzyme and pathway databases
BioCyc	PFLU205922:PFL_5256-MONOMER.
Family and domain databases
InterPro	IPR014895. Alginate_lyase_2. IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF08787. Alginate_lyase2. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3K5G1_PSEPF

Accession

Primary (citable) accession number: Q3K5G1

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	December 14, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)