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Protein

Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase

Gene

mdcB

Organism
Pseudomonas fluorescens (strain Pf0-1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the formation of 2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase.UniRule annotation

Catalytic activityi

ATP + 3'-dephospho-CoA = 2'-(5-triphospho-alpha-D-ribosyl)-3'-dephospho-CoA + adenine.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciPFLU205922:GJBD-5390-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthaseUniRule annotation (EC:2.4.2.52UniRule annotation)
Short name:
2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthaseUniRule annotation
Gene namesi
Name:mdcBUniRule annotation
Ordered Locus Names:Pfl01_5301
OrganismiPseudomonas fluorescens (strain Pf0-1)
Taxonomic identifieri205922 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002704 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 290290Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasePRO_0000255404Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi205922.Pfl01_5301.

Family & Domainsi

Sequence similaritiesi

Belongs to the CitG/MdcB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108K6F. Bacteria.
COG1767. LUCA.
HOGENOMiHOG000258582.
KOiK13930.
OMAiQSWQRPA.
OrthoDBiEOG6WHNRS.

Family and domain databases

HAMAPiMF_01883. MdcB.
InterProiIPR002736. CitG.
IPR017555. TriPribosyl-deP-CoA_syn.
[Graphical view]
PfamiPF01874. CitG. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03132. malonate_mdcB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3K5B6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHALNLQPKT ITLAERLADL AVDALIDEAD LSPKPALVDR RGNGAHTDLH
60 70 80 90 100
LGLMHASALA LWPAFKEMAE AALEFGEIGL PLREAIGRIG REGEQAMLAT
110 120 130 140 150
THGVNTHRGA IWALGLLVTA AALDTKSTSA GAVTLRAARL ALLDDRYAPR
160 170 180 190 200
PLSHGAQVAQ RYGARGAREE AQLGFPSVVQ RGLPQLKRSR AAGHGEQNAR
210 220 230 240 250
LDALLAIMTD LADTCVLYRA GEQGLHAMQH GARAVLDAGG SASLTGRRRL
260 270 280 290
HELDQQLIAL NASPGGAADL LAASLLLDRI ERDGILQGAF
Length:290
Mass (Da):30,649
Last modified:November 8, 2005 - v1
Checksum:i1E7C48FBFAFB0D9F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000094 Genomic DNA. Translation: ABA77038.1.
RefSeqiWP_011336359.1. NC_007492.2.

Genome annotation databases

EnsemblBacteriaiABA77038; ABA77038; Pfl01_5301.
KEGGipfo:Pfl01_5301.
PATRICi19892822. VBIPseFlu44242_5316.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000094 Genomic DNA. Translation: ABA77038.1.
RefSeqiWP_011336359.1. NC_007492.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi205922.Pfl01_5301.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA77038; ABA77038; Pfl01_5301.
KEGGipfo:Pfl01_5301.
PATRICi19892822. VBIPseFlu44242_5316.

Phylogenomic databases

eggNOGiENOG4108K6F. Bacteria.
COG1767. LUCA.
HOGENOMiHOG000258582.
KOiK13930.
OMAiQSWQRPA.
OrthoDBiEOG6WHNRS.

Enzyme and pathway databases

BioCyciPFLU205922:GJBD-5390-MONOMER.

Family and domain databases

HAMAPiMF_01883. MdcB.
InterProiIPR002736. CitG.
IPR017555. TriPribosyl-deP-CoA_syn.
[Graphical view]
PfamiPF01874. CitG. 1 hit.
[Graphical view]
TIGRFAMsiTIGR03132. malonate_mdcB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Pf0-1.

Entry informationi

Entry nameiMDCB_PSEPF
AccessioniPrimary (citable) accession number: Q3K5B6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: November 8, 2005
Last modified: November 11, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.