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Q3JUZ4 (Q3JUZ4_BURP1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Cobalamin biosynthesis protein CobD HAMAP-Rule MF_00024
Gene names
Name:cobD HAMAP-Rule MF_00024 EMBL ABA48615.1
Ordered Locus Names:BURPS1710b_1198
OrganismBurkholderia pseudomallei (strain 1710b) [Complete proteome] [HAMAP] EMBL ABA48615.1
Taxonomic identifier320372 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group ›

Protein attributes

Sequence length417 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group By similarity. HAMAP-Rule MF_00024

Pathway

Cofactor biosynthesis; adenosylcobalamin biosynthesis. HAMAP-Rule MF_00024

Subcellular location

Cell membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_00024.

Sequence similarities

Belongs to the CobD/CbiB family. HAMAP-Rule MF_00024

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Transmembrane102 – 12221Helical; By similarity HAMAP-Rule MF_00024
Transmembrane157 – 17721Helical; By similarity HAMAP-Rule MF_00024
Transmembrane178 – 19821Helical; By similarity HAMAP-Rule MF_00024
Transmembrane256 – 27621Helical; By similarity HAMAP-Rule MF_00024
Transmembrane344 – 36421Helical; By similarity HAMAP-Rule MF_00024
Transmembrane397 – 41721Helical; By similarity HAMAP-Rule MF_00024

Sequences

Sequence LengthMass (Da)Tools
Q3JUZ4 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 246B1E641073FFED

FASTA41744,425
        10         20         30         40         50         60 
MRARRLPHAV AHEPALPGRR PGRRRRALRR VRRRTRGGAA REPRAGDRRQ QRDRLRRRAA 

        70         80         90        100        110        120 
RQADAPLRRY ARPRQSAHRG ARDTRDGVRG RPARHGQGRG RTAMLMLSLP AVACLAVAGC 

       130        140        150        160        170        180 
VVDKLVGEPR AAHPLVAFGR LAARLERALN TGRRGRLAGL AAWLAAVAPP VALAAWLAAA 

       190        200        210        220        230        240 
LPWPLAAALH VALLWFALGA RSLAEHVAPI AAALLRRDLA AARALTARIV SRDTSAADEA 

       250        260        270        280        290        300 
ALSRAAVESA LENGNDAIFG ALFWFAIAGG PGALLFRLAN TLDAMWGYRT PRFARFGWAA 

       310        320        330        340        350        360 
ARIDDALNWA PARLTAASYA LLGDTANAWR CWRAQARHWD SPNAGPVMAA GAGSLNVVIG 

       370        380        390        400        410 
GPAVYHGAIE DRPVLGAGEP AAPVHVAAAL SLVARTMILW LALLVAGAAL SIATHHG

« Hide

References

[1]Woods D.E., Nierman W.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1710b EMBL ABA48615.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000124 Genomic DNA. Translation: ABA48615.1.
RefSeqYP_332609.2. NC_007434.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING320372.BURPS1710b_1198.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA48615; ABA48615; BURPS1710b_1198.
GeneID3688559.
KEGGbpm:BURPS1710b_1198.
PATRIC19234642. VBIBurPse115837_1209.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1270.
HOGENOMHOG000290070.
KOK02227.
OMARWHPLVG.
ProtClustDBPRK01209.

Enzyme and pathway databases

UniPathwayUPA00148.

Family and domain databases

HAMAPMF_00024. CobD_CbiB.
InterProIPR004485. Cobalamin_biosynth_CobD/CbiB.
[Graphical view]
PfamPF03186. CobD_Cbib. 1 hit.
[Graphical view]
TIGRFAMsTIGR00380. cobD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JUZ4_BURP1
AccessionPrimary (citable) accession number: Q3JUZ4
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 1, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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