Q3JR08 (Q3JR08_BURP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ABA48233.1
EC=5.1.1.1 EMBL ABA48233.1

Gene names

Ordered Locus Names:

BURPS1710b_2603

Organism

Burkholderia pseudomallei (strain 1710b) [Complete proteome] [HAMAP] EMBL ABA48233.1

Taxonomic identifier

320372 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group › Burkholderia pseudomallei

Protein attributes

Sequence length	356 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608 EMBL ABA48233.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3JR08 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: B29D6F1F142DD41E	FASTA	356	38,334
	10 20 30 40 50 60 MPRPISATIH TAALANNLSV VRRHAAQSKV WAIVKANAYG HGLARVFPGL RGTDGFGLLD 70 80 90 100 110 120 LDEAVKLREL GWAGPILLLE GFFRSTDIDV IDRYSLTTAV HNDEQMRMLE TARLSKPVNV 130 140 150 160 170 180 QLKMNSGMNR LGYTPEKYRA AWERARACPG IGQITLMTHF SDADGERGVA EQMATFERGA 190 200 210 220 230 240 QGIAGARSFA NSAAVLWHPS AHFDWVRPGI MLYGASPSGR AADIADRGLK PTMTLASELI 250 260 270 280 290 300 AVQTLAKGQA VGYGSMFVAE DTMRIGVVAC GYADGYPRIA PEGTPVVVDG VRTRIVGRVS 310 320 330 340 350 MDMLTVDLTP VPQAGVGARV ELWGETLPID DVAARCMTVG YELMCAVAPR VPVRAE

References

[1]	Woods D.E., Nierman W.C. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 1710b EMBL ABA48233.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000124 Genomic DNA. Translation: ABA48233.1.
RefSeq	YP_333995.1. NC_007434.1.
3D structure databases
ProteinModelPortal	Q3JR08.
ModBase	Search...
Protein-protein interaction databases
STRING	320372.BURPS1710b_2603.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABA48233; ABA48233; BURPS1710b_2603.
GeneID	3689889.
KEGG	bpm:BURPS1710b_2603.
PATRIC	19237720. VBIBurPse115837_2730.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031446.
KO	K01775.
OMA	GQWQDIA.
ProtClustDB	PRK00053.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3JR08_BURP1

Accession

Primary (citable) accession number: Q3JR08

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)