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Q3JQR6 (Q3JQR6_BURP1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Tryptophan--tRNA ligase HAMAP-Rule MF_00140
EC=6.1.1.2 HAMAP-Rule MF_00140
Alternative name(s):
Tryptophanyl-tRNA synthetase HAMAP-Rule MF_00140
Gene names
Name:trpS-1 EMBL ABA48736.1
Synonyms:trpS HAMAP-Rule MF_00140
Ordered Locus Names:BURPS1710b_2701
OrganismBurkholderia pseudomallei (strain 1710b) [Complete proteome] [HAMAP] EMBL ABA48736.1
Taxonomic identifier320372 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group ›

Protein attributes

Sequence length633 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophyl-tRNA(Trp). SAAS SAAS024109 HAMAP-Rule MF_00140

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00140

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00140.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489 HAMAP-Rule MF_00140

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif245 – 2539"HIGH" region By similarity HAMAP-Rule MF_00140
Motif498 – 5025"KMSKS" region By similarity HAMAP-Rule MF_00140

Sites

Binding site5011ATP By similarity HAMAP-Rule MF_00140

Sequences

Sequence LengthMass (Da)Tools
Q3JQR6 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: DD546403931268E9

FASTA63371,160
        10         20         30         40         50         60 
MPLVTITRYG CFFPDTDDCR LRTARGLRDH AARGRPRLCR SPAGRQHRVH DGPRVVQPDA 

        70         80         90        100        110        120 
PHRSVRHDRD SARAVLPHER RVPVRLREAR ARHVPQSAQS SLGKPLGRAR GAGLQFRPGA 

       130        140        150        160        170        180 
DLGLREHRPR RAGGRRAVLH AHGRSGRRRE SRARGAEPLS AAAARRRARA RGAAAAEAID 

       190        200        210        220        230        240 
RAVSARAVRL LHRARARRDG PADETLAAAA GGRRLCRRDG HPDSFRLALL TTIMFPDRIF 

       250        260        270        280        290        300 
SGMRPTGSLH LGHYHGVLKN WVKLQSEYPC FFCVVDWHAL TTHYETPEVI EKNVWDVLID 

       310        320        330        340        350        360 
WLASGIDPAQ ATLFIQSKVP EHAELALLLG MSTPLGWLER VPTYKEQIEK LKDKDLSTYG 

       370        380        390        400        410        420 
FLGYPVLMAA DILLYRGSLV PVGEDQVPHV EMTREIARRF NYLYGREPGF EEKALEAAKK 

       430        440        450        460        470        480 
LGGKRAKLYH ELRNAYQQEG DDEALEQARA MLQESQSLSM SDRERLFGYL EGARKIILVE 

       490        500        510        520        530        540 
PQALLTEASR MPGLDGQKMS KSYGNTIGLR EDAETITKKV RTMPTDPARV RRSDPGDPDK 

       550        560        570        580        590        600 
CPVWQLHQVY TDETTHEWVQ QGCRSAGIGC LDCKQPVVEG ILREQQPMLE RAQKYMDDPS 

       610        620        630 
LLRAIVADGC DKARKHATET MRDVREAMGL SYS

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References

[1]Woods D.E., Nierman W.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1710b EMBL ABA48736.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000124 Genomic DNA. Translation: ABA48736.1.
RefSeqYP_334087.2. NC_007434.1.

3D structure databases

ProteinModelPortalQ3JQR6.
ModBaseSearch...

Protein-protein interaction databases

STRING320372.BURPS1710b_2701.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA48736; ABA48736; BURPS1710b_2701.
GeneID3690412.
KEGGbpm:BURPS1710b_2701.
PATRIC19237930. VBIBurPse115837_2829.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0180.
HOGENOMHOG000059941.
KOK01867.
OMAMRESEES.
ProtClustDBPRK12283.

Family and domain databases

Gene3D3.40.50.620. 2 hits.
HAMAPMF_00140_B. Trp_tRNA_synth_B.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR002305. aa-tRNA-synth_Ic.
IPR014729. Rossmann-like_a/b/a_fold.
IPR002306. Trp-tRNA-ligase.
IPR024109. Trp-tRNA-ligase_bac-type.
[Graphical view]
PANTHERPTHR10055. PTHR10055. 1 hit.
PfamPF00579. tRNA-synt_1b. 2 hits.
[Graphical view]
PRINTSPR01039. TRNASYNTHTRP.
TIGRFAMsTIGR00233. trpS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3JQR6_BURP1
AccessionPrimary (citable) accession number: Q3JQR6
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 1, 2013
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info