Reviewed, UniProtKB/Swiss-Prot Q3JPA3 (HGD_BURP1)

Names and origin

Protein names

Recommended name:
    Homogentisate 1,2-dioxygenase
    EC=1.13.11.5
Alternative name(s):
    Homogentisicase
    Homogentisate oxygenase
    Homogentisic acid oxidase

Gene names

Name:	hmgA
Ordered Locus Names:	BURPS1710b_3228

Organism

Burkholderia pseudomallei (strain 1710b) [Complete proteome] [HAMAP]

Taxonomic identifier

320372 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › pseudomallei group

Protein attributes

Sequence length	450 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	Homogentisate + O(2) = 4-maleylacetoacetate.
Cofactor	Iron By similarity.
Pathway	Amino-acid degradation; L-phenylalanine degradation; acetoacetic acid and fumarate from L-phenylalanine: step 4/6.
Sequence similarities	Belongs to the homogentisate dioxygenase family.

Ontologies

Keywords
Biological process	Phenylalanine catabolism Tyrosine catabolism
Ligand	Iron Metal-binding
Molecular function	Dioxygenase Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	L-phenylalanine catabolic process Inferred from electronic annotation. Source: HAMAP oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW tyrosine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	homogentisate 1,2-dioxygenase activity Inferred from electronic annotation. Source: HAMAP iron ion binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 450	450	Homogentisate 1,2-dioxygenase		PRO_0000225787
Sites
	Metal binding	347	1	Iron By similarity
	Metal binding	353	1	Iron By similarity
	Metal binding	383	1	Iron By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q3JPA3-1 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 1BC1019C4C2C398F	FASTA	450	50,130
	10 20 30 40 50 60 MERTTIMTLD FSKPGEAGYQ SGFANEFATE ALPGALPHAR NSPQRAPYGL YAEQFSGTAF 70 80 90 100 110 120 TAPRGHNRRS WLYRIRPAAV HRPFELVSGE RRIVAEFGDS DDVPPTPPNQ LRWDPLPMPA 130 140 150 160 170 180 QPTDFVDGWV TMAGNGSAAA MSGCAIHLYA ANRSMRERFF YSADGELLIV PQEGRLFIMT 190 200 210 220 230 240 ELGRLDVEPF EIAVIPRGVR FAVALPDGRA RGYVCENFGA LLRLPDLGPI GSNGLANPRD 250 260 270 280 290 300 FLTPHASYED REGAFELVAK LNGRLWRADI DHSPFDVVAW HGNYAPYKYD LRHFNTIGSI 310 320 330 340 350 360 SYDHPDPSIF LVLQSQSDTP GVDAIDFVIF PPRWLAAEDT FRPPWFHRNV ASEFMGLVHG 370 380 390 400 410 420 VYDAKAEGFV PGGASLHNCM SGHGPDADTF EKASSIDTSK PNKVGDTMAF MFETRTLIRP 430 440 450 TRFALDTAQL QANYFECWQG LKKHFNPEQR

References

[1]	Woods D.E., Nierman W.C. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000124 Genomic DNA. Translation: ABA47587.1.
RefSeq	YP_334600.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3688297.
GenomeReviews	Gene locus BURPS1710b_3228 in contig CP000124_GR.
KEGG	bpm:BURPS1710b_3228.
TIGR	BURPS1710b_3228.
Phylogenomic databases
HOGENOM	Q3JPA3.
Family and domain databases
HAMAP	MF_00334. [Tree]
InterPro	IPR005708. Homogentis_dOase. [Graphical view]
PANTHER	PTHR11056. Homogentis_dOase. 1 hit.
Pfam	PF04209. HgmA. 1 hit. [Graphical view]
TIGRFAMs	TIGR01015. hmgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

HGD_BURP1

Accession

Primary (citable) accession number: Q3JPA3

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 7, 2006
Last sequence update:	November 8, 2005
Last modified:	November 4, 2008
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)