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Q3JIW1 (Q3JIW1_BURP1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ABA51818.1
Gene names
Ordered Locus Names:BURPS1710b_A1335 EMBL ABA51818.1
OrganismBurkholderia pseudomallei (strain 1710b) [Complete proteome] [HAMAP] EMBL ABA51818.1
Taxonomic identifier320372 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Protein attributes

Sequence length980 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q3JIW1 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 0C63CB5DB13BC7A0

FASTA980105,516
        10         20         30         40         50         60 
MRGRGLRDSG GKHEQWLLIK ERDGDARDQA DYDVLRARPG SVLGGARSAR ARRGRAAEPT 

        70         80         90        100        110        120 
ERDAAAPKRA RASVPKGRAE AKTSGRAPRT VSNGTAGAGK GASKRASKRE GTNTGNGARS 

       130        140        150        160        170        180 
GKGSGKGAGE GVATSRRKRA AAPQSSDVDS ADTDSPAARG LALPAGLAAR FGLSGAKRAA 

       190        200        210        220        230        240 
LPRTLRPQLA TLVDTPTPGK DWLYEAKFDG YRVLIRIDRG AASRPIAVYT REGLDWSAKF 

       250        260        270        280        290        300 
AAQLDALARL PVDRGWLDGE AVVLDRAGVP DFQALQNALG AGRSNDVTLF LFDVPFLNGF 

       310        320        330        340        350        360 
DLRGVPLERR RALLAALVAA HASDVLRYSE SLAFEAADLL TGACDAGLEG LIGKRRDGRY 

       370        380        390        400        410        420 
VEGRSRSWIK LKCRRRQEFV IGGYTEPAGR RSGFGALLLG VYARAPGDEG ERRTRGAAET 

       430        440        450        460        470        480 
RDERRRASHA SRTSRTSRTS RTSRTSRAPD AGAARAPQAR PLALRYVGRV GTGFGERTLR 

       490        500        510        520        530        540 
ALARTLREHE TGRMPFADVP RERSGTPVHW VKPVLVAECE FAEWTGDGIV RQASFVGLRE 

       550        560        570        580        590        600 
DKPARTIVRE QPQSMETEAM NEHADEHTDE HTDARAERRT GGRTRRKARD DGARDAPALA 

       610        620        630        640        650        660 
RHPKRGDAGS SARKGARDGE AGKRAAAGSS PSSSPSSSTS TSPSISASGR TRGGGRSASR 

       670        680        690        700        710        720 
DRAGDADEGA NEDANDHAPR ERAGAPKVAG VRVSHPGRVI DPHTGTRKLD LVEYWEWIAP 

       730        740        750        760        770        780 
WLLPHLKGRP VSLVRAPADI GGELFFQKHA DKLEIPNVAL HPGLDPGHEA LITIDDVKGL 

       790        800        810        820        830        840 
VGAAQMGTIE LHTWNAHVSN IEKPDRAVFD LDPDPSLDWR AVIEAAQLTR ALLDELGLVS 

       850        860        870        880        890        900 
FCKTSGGKGL HVVVPLARHA GWDDVKAFAH AVARHMAATL PERFTATMGP RNRKGKIFVD 

       910        920        930        940        950        960 
YLRNNRGAST IAAYSVRARP GLGVSVPIAW DELPDTTGAA QWTLANLHER LDALKHDPWR 

       970        980 
AYAHVRQRVT AALRKRLSDG 

« Hide

References

[1]Woods D.E., Nierman W.C.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 1710b EMBL ABA51818.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000125 Genomic DNA. Translation: ABA51818.1.
RefSeqYP_336492.1. NC_007435.1.

3D structure databases

ProteinModelPortalQ3JIW1.
SMRQ3JIW1. Positions 689-977.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING320372.BURPS1710b_A1335.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA51818; ABA51818; BURPS1710b_A1335.
GeneID3694285.
KEGGbpm:BURPS1710b_A1335.
PATRIC19243195. VBIBurPse115837_5434.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAFASEPRE.
OrthoDBEOG661H49.
ProtClustDBCLSK711266.

Enzyme and pathway databases

BioCycBPSE320372:GBYB-5133-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 2 hits.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3JIW1_BURP1
AccessionPrimary (citable) accession number: Q3JIW1
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: April 16, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)