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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

BURPS1710b_A1336

Organism
Burkholderia pseudomallei (strain 1710b)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBPSE320372:GBYB-5135-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:BURPS1710b_A1336Imported
OrganismiBurkholderia pseudomallei (strain 1710b)Imported
Taxonomic identifieri320372 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group
ProteomesiUP000002700 Componenti: Chromosome II

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000046158.
OrthoDBiEOG661H49.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3JIV9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGKLSVYRS RRRFGETPEP EGARRSPRRT KGTGRAGDES KRRARGDAAA
60 70 80 90 100
SSRGERAARR GRAQQPAPAR GRSALHYVIQ EHHARRLHYD FRLELDGTLK
110 120 130 140 150
SWAIPKGPSL DPSVKRLAVH VEDHPLEYAA FEGEIPEGHY GAGSVIVWDR

GA
Length:152
Mass (Da):16,886
Last modified:November 8, 2005 - v1
Checksum:i46F0BAD18A99B842
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000125 Genomic DNA. Translation: ABA52224.1.
RefSeqiWP_011326368.1. NC_007435.1.
YP_336494.1. NC_007435.1.

Genome annotation databases

EnsemblBacteriaiABA52224; ABA52224; BURPS1710b_A1336.
KEGGibpm:BURPS1710b_A1336.
PATRICi19243197. VBIBurPse115837_5435.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000125 Genomic DNA. Translation: ABA52224.1.
RefSeqiWP_011326368.1. NC_007435.1.
YP_336494.1. NC_007435.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA52224; ABA52224; BURPS1710b_A1336.
KEGGibpm:BURPS1710b_A1336.
PATRICi19243197. VBIBurPse115837_5435.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000046158.
OrthoDBiEOG661H49.

Enzyme and pathway databases

BioCyciBPSE320372:GBYB-5135-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Woods D.E., Nierman W.C.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1710bImported.

Entry informationi

Entry nameiQ3JIV9_BURP1
AccessioniPrimary (citable) accession number: Q3JIV9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: June 24, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.