Q3JF29 (Q3JF29_NITOC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Formylmethanofuran dehydrogenase, subunit B EMBL ABA56567.1
EC=1.2.99.5 EMBL ABA56567.1

Gene names

Ordered Locus Names:

Noc_0025

Organism

Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56567.1

Taxonomic identifier

323261 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus

Protein attributes

Sequence length	425 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ABA56567.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	methanogenesis Inferred from electronic annotation. Source: InterPro
Molecular function	formylmethanofuran dehydrogenase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3JF29 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 07D8813E5F8F0628	FASTA	425	46,702
	10 20 30 40 50 60 MFYHTQTGIW EEVPSPFCGI AADDLKVKVE GNRLTIIENG CPVTQPAFEQ EIGDSTPQIQ 70 80 90 100 110 120 GKTARLETAI ARTVKLLRQS RFPLISGLAT DVEGVRAALA LADYYGAVID HMDSEATLRN 130 140 150 160 170 180 MLALQAGGWI TTTLGEVRNR VDLLLVVGSD IEPCFPRFFE RYIWNPETLF GQDTAQREII 190 200 210 220 230 240 YLGQSPSGQA AFGPNGHAPL IIPCKQEKLP EVVAVLRAQV AGRPLQAESV AGITMEKIAA 250 260 270 280 290 300 LANRLKQAQY GVITWAAEQW TFPHAELTTQ MLYEIIMALN KTSRCSGLPL GGRNGQAAAN 310 320 330 340 350 360 QVCTWQTGYP VPISFARGYP DYDPYHYNTK RLLESGETDT LIWISAFDQD DTPPITSIPT 370 380 390 400 410 420 VVLGRAGMNF TQVPEVFIPI GTPGIDHAGH TYRTDNVIAV PLRKLRDSGL PSTAKIINTM LERSY

References

[1]

"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707." Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B. Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed: 16957257] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000127 Genomic DNA. Translation: ABA56567.1.
RefSeq	YP_342097.1. NC_007484.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3JF29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3705958.
GenomeReviews	Gene locus Noc_0025 in contig CP000127_GR.
KEGG	noc:Noc_0025.
NMPDR	fig|323261.3.peg.102.
PATRIC	22703678. VBINitOce57959_0087.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1029.
HOGENOM	HBG754302.
OMA	IPLVCID.
ProtClustDB	CLSK2395498.
Enzyme and pathway databases
BioCyc	NOCE323261:NOC_0025-MONOMER.
Family and domain databases
InterPro	IPR016457. Formylmethanofuran_DH_bsu. [Graphical view]
KO	K00201.
PIRSF	PIRSF005646. FwdB. 1 hit.
TIGRFAMs	TIGR03129. One_C_dehyd_B. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3JF29_NITOC

Accession

Primary (citable) accession number: Q3JF29

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)