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Q3JEW3

- GLGA1_NITOC

UniProt

Q3JEW3 - GLGA1_NITOC

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Protein

Glycogen synthase 1

Gene

glgA1

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei15 – 151ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-101-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 1UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 1UniRule annotation
Gene namesi
Name:glgA1UniRule annotation
Ordered Locus Names:Noc_0100
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 487487Glycogen synthase 1PRO_0000230248Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi323261.Noc_0100.

Structurei

3D structure databases

ProteinModelPortaliQ3JEW3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiSVYCGWV.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3JEW3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYIVMITPEC APIAKVGGLG DVVQGLSNEL SIRGNTVELI LPKYDCMRYE
60 70 80 90 100
RIWGLEKTHN NLWVPYHDQW IPCDVYFGFA EGLKCFFIEP HNGFFQRGTY
110 120 130 140 150
YGQPDDPQRF AFFCKAALEF MLRSNKYPEI IHCHDWQTGL VPVLLFEQYK
160 170 180 190 200
YLGMTHPRVC YTLHNMRHQG VTGGHILQQV GLDPAAYMTP ERLLDHTYPH
210 220 230 240 250
GVNLMKGGIV FSNFITTVSP RYLDEIRYTD QGYGLQHTLH EHSQKLGGIL
260 270 280 290 300
NGVDYKVWNP DIDPYIAARY NLKTLDKKYE NKTALRHRLW LRDEYKPIVG
310 320 330 340 350
VISRLDPQKG VELIRHALFY CLANGCQFVL LGASASNSIN ADFWYLKQYL
360 370 380 390 400
NDDPDCHLEI GYDEDLAHQI YAGADMLIVP SIYEPCGLTQ MIAMKYGTVP
410 420 430 440 450
IVRHVGGLAD TVFDANYAHK PYHERNGFVF HDFNHEGIEA ALHRAIGLWY
460 470 480
EYPQYFRELM ENGMRYDFSW NHPGQHYLNI YHHIQEI
Length:487
Mass (Da):56,489
Last modified:November 8, 2005 - v1
Checksum:i7C21E978FBF3C94A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA56633.1.
RefSeqiYP_342163.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA56633; ABA56633; Noc_0100.
GeneIDi3705860.
KEGGinoc:Noc_0100.
PATRICi22703846. VBINitOce57959_0170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA56633.1 .
RefSeqi YP_342163.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JEW3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0100.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA56633 ; ABA56633 ; Noc_0100 .
GeneIDi 3705860.
KEGGi noc:Noc_0100.
PATRICi 22703846. VBINitOce57959_0170.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi SVYCGWV.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci NOCE323261:GCI3-101-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848.

Entry informationi

Entry nameiGLGA1_NITOC
AccessioniPrimary (citable) accession number: Q3JEW3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 8, 2005
Last modified: October 1, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3