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Q3JEW3 (GLGA1_NITOC) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase 1

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase 1
Gene names
Name:glgA1
Ordered Locus Names:Noc_0100
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP]
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 487487Glycogen synthase 1 HAMAP-Rule MF_00484
PRO_0000230248

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q3JEW3 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 7C21E978FBF3C94A

FASTA48756,489
        10         20         30         40         50         60 
MYIVMITPEC APIAKVGGLG DVVQGLSNEL SIRGNTVELI LPKYDCMRYE RIWGLEKTHN 

        70         80         90        100        110        120 
NLWVPYHDQW IPCDVYFGFA EGLKCFFIEP HNGFFQRGTY YGQPDDPQRF AFFCKAALEF 

       130        140        150        160        170        180 
MLRSNKYPEI IHCHDWQTGL VPVLLFEQYK YLGMTHPRVC YTLHNMRHQG VTGGHILQQV 

       190        200        210        220        230        240 
GLDPAAYMTP ERLLDHTYPH GVNLMKGGIV FSNFITTVSP RYLDEIRYTD QGYGLQHTLH 

       250        260        270        280        290        300 
EHSQKLGGIL NGVDYKVWNP DIDPYIAARY NLKTLDKKYE NKTALRHRLW LRDEYKPIVG 

       310        320        330        340        350        360 
VISRLDPQKG VELIRHALFY CLANGCQFVL LGASASNSIN ADFWYLKQYL NDDPDCHLEI 

       370        380        390        400        410        420 
GYDEDLAHQI YAGADMLIVP SIYEPCGLTQ MIAMKYGTVP IVRHVGGLAD TVFDANYAHK 

       430        440        450        460        470        480 
PYHERNGFVF HDFNHEGIEA ALHRAIGLWY EYPQYFRELM ENGMRYDFSW NHPGQHYLNI 


YHHIQEI 

« Hide

References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA56633.1.
RefSeqYP_342163.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JEW3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0100.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA56633; ABA56633; Noc_0100.
GeneID3705860.
KEGGnoc:Noc_0100.
PATRIC22703846. VBINitOce57959_0170.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAWGLHEAY.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-101-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA1_NITOC
AccessionPrimary (citable) accession number: Q3JEW3
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 8, 2005
Last modified: February 19, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways