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Q3JEV2 (Q3JEV2_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.4.2 EMBL ABA56644.1
Gene names
Ordered Locus Names:Noc_0111 EMBL ABA56644.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56644.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length940 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3JEV2 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 1CA7173DF7E532E7

FASTA940105,598
        10         20         30         40         50         60 
MDATVKKQAS PSPLNAANAS YLEALYEKFL KDPNTVPAHW RIWFKRLQAG VPEQAAPEFP 

        70         80         90        100        110        120 
ARSPGPAVQP SAPSAVMTEG LTAEAAEKQI AVLQLINAYR FRGHQKANID PLRIYDRPVV 

       130        140        150        160        170        180 
SDLDPVFHGL TEEDMGKVFS TGSLIGIDQA PLEEIFALIK KIYCHTIGAE YMHITETAEK 

       190        200        210        220        230        240 
RWIQSYLEGA QDDPGPSVEL QRHILERLTA AEGLERYLHT NYVGQKRFSL EGGDSLIPLL 

       250        260        270        280        290        300 
DNLILYAGSK GVGEIVIGMA HRGRLNVLVN TLGKLPRDLF MEFEGQHETD NKRSGDVKYH 

       310        320        330        340        350        360 
LGFSADGDTP GGPVHITLAF NPSHLEIIDP VVEGSVRARQ QRRKDWLGDE VIPVLIHGDS 

       370        380        390        400        410        420 
AFAGQGVVME TFNMSQSRGF FTGGTLHIVI NNQIGFTTSN PLDTRSTVYC TDVAKMVQAP 

       430        440        450        460        470        480 
IFHVNGDDPE AVIFVTRLAL DYRMTFKKDV VIDLVCYRRQ GHNEADEPAV TQPLMYQKIR 

       490        500        510        520        530        540 
SHPTVRHLYA ERLAAQNIIA SEEADRMMNN YRQTLEQGTN VAPYAEEGAR SSRVNWKPFL 

       550        560        570        580        590        600 
GTQWDQPVET EVPLPRLQEL AAHIQQLPKG FELHSRVGHI LADRRKMAAG ALPIDWGFAE 

       610        620        630        640        650        660 
TLAYATLLNE GFSVRLTGQD SGRGTFFHRH AVLYNQKDGQ VYVPLEQVNP VQTDFSIIDS 

       670        680        690        700        710        720 
LLSEEAVLAF EYGYAATEPN TLVIWEAQFG DFVNGAQVVI DQFLASGEAK WSRLCGLVLF 

       730        740        750        760        770        780 
LPHGYEGQGP EHSSARLERF LQLCAEDNIQ VCVPTTPGQM FHMLRRQMLR PYRKPLVVMT 

       790        800        810        820        830        840 
PKSLLRHRLS VSSLDEFCSG AFRLVIGEVD DIKPAMVNRV ILCAGKVYYD LLQARREQKR 

       850        860        870        880        890        900 
QDVAILRLEQ LYPFPQQQLE RELERYRKAR EIVWCQEEPQ NQGAWDQLHR PLQGCLSRNQ 

       910        920        930        940 
SLHYTGRASS AAPAVGYFNL HLEQQRAVVE EAFGSMKESQ 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA56644.1.
RefSeqYP_342174.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JEV2.
SMRQ3JEV2. Positions 84-934.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0111.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA56644; ABA56644; Noc_0111.
GeneID3705871.
KEGGnoc:Noc_0111.
PATRIC22703876. VBINitOce57959_0185.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0567.
HOGENOMHOG000259588.
KOK00164.
OMAGHQNANL.
OrthoDBEOG6V1M1F.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-112-MONOMER.

Family and domain databases

Gene3D3.40.50.970. 2 hits.
InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 2 hits.
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JEV2_NITOC
AccessionPrimary (citable) accession number: Q3JEV2
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: June 11, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)