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Q3JEK9 (Q3JEK9_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.3.3 EMBL ABA56737.1
Gene names
Ordered Locus Names:Noc_0207 EMBL ABA56737.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56737.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length684 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q3JEK9 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 811381A7878EDA91

FASTA68478,726
        10         20         30         40         50         60 
MNKREIDPAR AELELERELT KEKSVEQSLP QQIVSLKERL FQQAVELKKV KATLKESEER 

        70         80         90        100        110        120 
FNQVAAMTGE WIWEQDDKGH YTYSSISVDA VLGYPWQALI GRCYDEFIPI EEQEKLRSKM 

       130        140        150        160        170        180 
RQGVETGQGF QHLIRRYRHR DGHLVFTEST AMPVFDEQNS LLKWRGIDRD ITATRRADEL 

       190        200        210        220        230        240 
VFMLSRALEQ SPNAILITDL KGNIEYVNTS FTRLTGYEAK EVIGKNPSLL QSGKTPLEQY 

       250        260        270        280        290        300 
RRLWETIRAG REWRDEIQDR KKSGELYWAL ETITALRDGE GNPTHFLAIQ EDITERKRVE 

       310        320        330        340        350        360 
AALRESEAQT RLIIENALDA IVLISANDSI TDWNPQAEKI FGWKREEVLG LSLAETIIPP 

       370        380        390        400        410        420 
RHREAHWQGL RRFLNTGKGP ILGKRVELSA LHRDGHEFPV ELTVLPLKVR NSYVFSGFLR 

       430        440        450        460        470        480 
DLTQQKETEE AIRQARVKLA VAQNEMRIAQ QIQESLFPPA PLVLPTVKIM GYCLPATHVG 

       490        500        510        520        530        540 
GDYFDYFQWR DKTIDIVIAD VSGHSVGPAL LMAEARSALK SQFHLHRTVV ETLSSLNETL 

       550        560        570        580        590        600 
YEDLDRADLF ITLCYLRYDM VTRQLTYANA GHLPPLLFRQ GQRCRQLDAD GLVLGVNREV 

       610        620        630        640        650        660 
IFETRSESLQ PGDMLFLYTD GIIEAENKKG DFFGIERLCD LLNEHHQAGS EPQEIITNII 

       670        680 
ERLQAFRHRK TFEDDVTMVV VKVL 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA56737.1.
RefSeqYP_342267.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JEK9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0207.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA56737; ABA56737; Noc_0207.
GeneID3706242.
KEGGnoc:Noc_0207.
PATRIC22704100. VBINitOce57959_0294.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000076217.
OMAYWALETI.
OrthoDBEOG6XDGRB.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-211-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013656. PAS_4.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF08448. PAS_4. 1 hit.
PF13426. PAS_9. 2 hits.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00086. PAC. 3 hits.
SM00091. PAS. 3 hits.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 3 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 3 hits.
PROSITEPS50113. PAC. 3 hits.
PS50112. PAS. 3 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3JEK9_NITOC
AccessionPrimary (citable) accession number: Q3JEK9
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)