Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q3JEJ8 (Q3JEJ8_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=5.4.99.16 EMBL ABA56748.1
Gene names
Ordered Locus Names:Noc_0218 EMBL ABA56748.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56748.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length650 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionIsomerase EMBL ABA56748.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

maltose alpha-D-glucosyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3JEJ8 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 7CEC9F21B5843175

FASTA65075,794
        10         20         30         40         50         60 
MSDARWMKQH STVSLRRLMP RLEARFKAQV DPDEWQGYVQ RLETHFPRLF DCLYRLYGQQ 

        70         80         90        100        110        120 
YDFFFHLESI LASATEMWWV RPAELKALDA LRTADPYWYQ SHRLVGAMCY VDLFAGDLVG 

       130        140        150        160        170        180 
LRERISYLTE LGINYLHLMP VFKVPEGDND GGYAVSSYRE INPNLGTMED LVRLADELRY 

       190        200        210        220        230        240 
RGISLCLDFV FNHTADEHDW ARRAQAGDRE YQEYYRMFPD RELPDAYERS LNPIFPDEHP 

       250        260        270        280        290        300 
GSFTYRNRIR KWIWTSFHNY QWDLNYENPV VFNRMLEEML FLANQGVEIL RLDAVAFVWK 

       310        320        330        340        350        360 
ELGTSCQNLP EAHIIIQAFN ALVRIAAPAM VFKSEAIVHP DDVRKYISEE ECQLSYNPQL 

       370        380        390        400        410        420 
MALLWDALAS RDIRLLRYGL QRRFALPSGC AWVNYVRCHD DIGWTFSDDD ARALDLDPQA 

       430        440        450        460        470        480 
HRQFLSQFYT ARFEGSFARG MPFQENLATG DARVSGTCAS LAGLEKGLYH NDETEIEYAI 

       490        500        510        520        530        540 
RKILLIHGVI LTIGGIPLIY LGDEIGVLND YDYEKDLAKI GDTRWLHRLP FDEARAEQRW 

       550        560        570        580        590        600 
DFTTVPGRIY QGLLRLIQIR QQNLAFTRAE TEVVDTGNDH VFGYFRNHDE YTVLILANFS 

       610        620        630        640        650 
DFTQHLEARR LRMLGLRKTE VDLFAGKTVT ATRELSLEPY AFMVLARPGK 

« Hide

References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA56748.1.
RefSeqYP_342278.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JEJ8.
SMRQ3JEJ8. Positions 31-646.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0218.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA56748; ABA56748; Noc_0218.
GeneID3706273.
KEGGnoc:Noc_0218.
PATRIC22704126. VBINitOce57959_0307.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000244643.
KOK05343.
OMAVNYVRCH.
OrthoDBEOG6R87D9.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-222-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR019492. Cyclo-malto-dextrinase_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF10438. Cyc-maltodext_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JEJ8_NITOC
AccessionPrimary (citable) accession number: Q3JEJ8
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)