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Q3JEJ8

- Q3JEJ8_NITOC

UniProt

Q3JEJ8 - Q3JEJ8_NITOC

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Protein
Submitted name:

Alpha amylase, catalytic region

Gene

Noc_0218

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. maltose alpha-D-glucosyltransferase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-222-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic regionImported (EC:5.4.99.16Imported)
Gene namesi
Ordered Locus Names:Noc_0218Imported
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi323261.Noc_0218.

Structurei

3D structure databases

ProteinModelPortaliQ3JEJ8.
SMRiQ3JEJ8. Positions 31-646.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000244643.
KOiK05343.
OMAiVNYVRCH.
OrthoDBiEOG6R87D9.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR019492. Cyclo-malto-dextrinase_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF10438. Cyc-maltodext_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3JEJ8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSDARWMKQH STVSLRRLMP RLEARFKAQV DPDEWQGYVQ RLETHFPRLF
60 70 80 90 100
DCLYRLYGQQ YDFFFHLESI LASATEMWWV RPAELKALDA LRTADPYWYQ
110 120 130 140 150
SHRLVGAMCY VDLFAGDLVG LRERISYLTE LGINYLHLMP VFKVPEGDND
160 170 180 190 200
GGYAVSSYRE INPNLGTMED LVRLADELRY RGISLCLDFV FNHTADEHDW
210 220 230 240 250
ARRAQAGDRE YQEYYRMFPD RELPDAYERS LNPIFPDEHP GSFTYRNRIR
260 270 280 290 300
KWIWTSFHNY QWDLNYENPV VFNRMLEEML FLANQGVEIL RLDAVAFVWK
310 320 330 340 350
ELGTSCQNLP EAHIIIQAFN ALVRIAAPAM VFKSEAIVHP DDVRKYISEE
360 370 380 390 400
ECQLSYNPQL MALLWDALAS RDIRLLRYGL QRRFALPSGC AWVNYVRCHD
410 420 430 440 450
DIGWTFSDDD ARALDLDPQA HRQFLSQFYT ARFEGSFARG MPFQENLATG
460 470 480 490 500
DARVSGTCAS LAGLEKGLYH NDETEIEYAI RKILLIHGVI LTIGGIPLIY
510 520 530 540 550
LGDEIGVLND YDYEKDLAKI GDTRWLHRLP FDEARAEQRW DFTTVPGRIY
560 570 580 590 600
QGLLRLIQIR QQNLAFTRAE TEVVDTGNDH VFGYFRNHDE YTVLILANFS
610 620 630 640 650
DFTQHLEARR LRMLGLRKTE VDLFAGKTVT ATRELSLEPY AFMVLARPGK
Length:650
Mass (Da):75,794
Last modified:November 8, 2005 - v1
Checksum:i7CEC9F21B5843175
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA56748.1.
RefSeqiWP_011330266.1. NC_007484.1.
YP_342278.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA56748; ABA56748; Noc_0218.
GeneIDi3706273.
KEGGinoc:Noc_0218.
PATRICi22704126. VBINitOce57959_0307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA56748.1 .
RefSeqi WP_011330266.1. NC_007484.1.
YP_342278.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JEJ8.
SMRi Q3JEJ8. Positions 31-646.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0218.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA56748 ; ABA56748 ; Noc_0218 .
GeneIDi 3706273.
KEGGi noc:Noc_0218.
PATRICi 22704126. VBINitOce57959_0307.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000244643.
KOi K05343.
OMAi VNYVRCH.
OrthoDBi EOG6R87D9.

Enzyme and pathway databases

BioCyci NOCE323261:GCI3-222-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR019492. Cyclo-malto-dextrinase_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF10438. Cyc-maltodext_C. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848Imported.

Entry informationi

Entry nameiQ3JEJ8_NITOC
AccessioniPrimary (citable) accession number: Q3JEJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: October 1, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3