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Q3JEJ8

- Q3JEJ8_NITOC

UniProt

Q3JEJ8 - Q3JEJ8_NITOC

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Protein
Submitted name: Alpha amylase, catalytic region
Gene
Noc_0218
Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. maltose alpha-D-glucosyltransferase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-222-MONOMER.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase, catalytic regionImported (EC:5.4.99.16Imported)
Gene namesi
Ordered Locus Names:Noc_0218Imported
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi323261.Noc_0218.

Structurei

3D structure databases

ProteinModelPortaliQ3JEJ8.
SMRiQ3JEJ8. Positions 31-646.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000244643.
KOiK05343.
OMAiVNYVRCH.
OrthoDBiEOG6R87D9.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR019492. Cyclo-malto-dextrinase_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF10438. Cyc-maltodext_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3JEJ8-1 [UniParc]FASTAAdd to Basket

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MSDARWMKQH STVSLRRLMP RLEARFKAQV DPDEWQGYVQ RLETHFPRLF    50
DCLYRLYGQQ YDFFFHLESI LASATEMWWV RPAELKALDA LRTADPYWYQ 100
SHRLVGAMCY VDLFAGDLVG LRERISYLTE LGINYLHLMP VFKVPEGDND 150
GGYAVSSYRE INPNLGTMED LVRLADELRY RGISLCLDFV FNHTADEHDW 200
ARRAQAGDRE YQEYYRMFPD RELPDAYERS LNPIFPDEHP GSFTYRNRIR 250
KWIWTSFHNY QWDLNYENPV VFNRMLEEML FLANQGVEIL RLDAVAFVWK 300
ELGTSCQNLP EAHIIIQAFN ALVRIAAPAM VFKSEAIVHP DDVRKYISEE 350
ECQLSYNPQL MALLWDALAS RDIRLLRYGL QRRFALPSGC AWVNYVRCHD 400
DIGWTFSDDD ARALDLDPQA HRQFLSQFYT ARFEGSFARG MPFQENLATG 450
DARVSGTCAS LAGLEKGLYH NDETEIEYAI RKILLIHGVI LTIGGIPLIY 500
LGDEIGVLND YDYEKDLAKI GDTRWLHRLP FDEARAEQRW DFTTVPGRIY 550
QGLLRLIQIR QQNLAFTRAE TEVVDTGNDH VFGYFRNHDE YTVLILANFS 600
DFTQHLEARR LRMLGLRKTE VDLFAGKTVT ATRELSLEPY AFMVLARPGK 650
Length:650
Mass (Da):75,794
Last modified:November 8, 2005 - v1
Checksum:i7CEC9F21B5843175
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000127 Genomic DNA. Translation: ABA56748.1.
RefSeqiWP_011330266.1. NC_007484.1.
YP_342278.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA56748; ABA56748; Noc_0218.
GeneIDi3706273.
KEGGinoc:Noc_0218.
PATRICi22704126. VBINitOce57959_0307.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000127 Genomic DNA. Translation: ABA56748.1 .
RefSeqi WP_011330266.1. NC_007484.1.
YP_342278.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JEJ8.
SMRi Q3JEJ8. Positions 31-646.
ModBasei Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0218.

Protein family/group databases

CAZyi GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA56748 ; ABA56748 ; Noc_0218 .
GeneIDi 3706273.
KEGGi noc:Noc_0218.
PATRICi 22704126. VBINitOce57959_0307.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000244643.
KOi K05343.
OMAi VNYVRCH.
OrthoDBi EOG6R87D9.

Enzyme and pathway databases

BioCyci NOCE323261:GCI3-222-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProi IPR019492. Cyclo-malto-dextrinase_C.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF10438. Cyc-maltodext_C. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848.

Entry informationi

Entry nameiQ3JEJ8_NITOC
AccessioniPrimary (citable) accession number: Q3JEJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: September 3, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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