Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q3JEJ8

- Q3JEJ8_NITOC

UniProt

Q3JEJ8 - Q3JEJ8_NITOC

Protein
Submitted name:

Alpha amylase, catalytic region

Gene

Noc_0218

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. maltose alpha-D-glucosyltransferase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    IsomeraseImported

    Enzyme and pathway databases

    BioCyciNOCE323261:GCI3-222-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase, catalytic regionImported (EC:5.4.99.16Imported)
    Gene namesi
    Ordered Locus Names:Noc_0218Imported
    OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
    Taxonomic identifieri323261 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
    ProteomesiUP000006838: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi323261.Noc_0218.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3JEJ8.
    SMRiQ3JEJ8. Positions 31-646.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000244643.
    KOiK05343.
    OMAiVNYVRCH.
    OrthoDBiEOG6R87D9.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR019492. Cyclo-malto-dextrinase_C.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF10438. Cyc-maltodext_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q3JEJ8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDARWMKQH STVSLRRLMP RLEARFKAQV DPDEWQGYVQ RLETHFPRLF    50
    DCLYRLYGQQ YDFFFHLESI LASATEMWWV RPAELKALDA LRTADPYWYQ 100
    SHRLVGAMCY VDLFAGDLVG LRERISYLTE LGINYLHLMP VFKVPEGDND 150
    GGYAVSSYRE INPNLGTMED LVRLADELRY RGISLCLDFV FNHTADEHDW 200
    ARRAQAGDRE YQEYYRMFPD RELPDAYERS LNPIFPDEHP GSFTYRNRIR 250
    KWIWTSFHNY QWDLNYENPV VFNRMLEEML FLANQGVEIL RLDAVAFVWK 300
    ELGTSCQNLP EAHIIIQAFN ALVRIAAPAM VFKSEAIVHP DDVRKYISEE 350
    ECQLSYNPQL MALLWDALAS RDIRLLRYGL QRRFALPSGC AWVNYVRCHD 400
    DIGWTFSDDD ARALDLDPQA HRQFLSQFYT ARFEGSFARG MPFQENLATG 450
    DARVSGTCAS LAGLEKGLYH NDETEIEYAI RKILLIHGVI LTIGGIPLIY 500
    LGDEIGVLND YDYEKDLAKI GDTRWLHRLP FDEARAEQRW DFTTVPGRIY 550
    QGLLRLIQIR QQNLAFTRAE TEVVDTGNDH VFGYFRNHDE YTVLILANFS 600
    DFTQHLEARR LRMLGLRKTE VDLFAGKTVT ATRELSLEPY AFMVLARPGK 650
    Length:650
    Mass (Da):75,794
    Last modified:November 8, 2005 - v1
    Checksum:i7CEC9F21B5843175
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA56748.1.
    RefSeqiWP_011330266.1. NC_007484.1.
    YP_342278.1. NC_007484.1.

    Genome annotation databases

    EnsemblBacteriaiABA56748; ABA56748; Noc_0218.
    GeneIDi3706273.
    KEGGinoc:Noc_0218.
    PATRICi22704126. VBINitOce57959_0307.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA56748.1 .
    RefSeqi WP_011330266.1. NC_007484.1.
    YP_342278.1. NC_007484.1.

    3D structure databases

    ProteinModelPortali Q3JEJ8.
    SMRi Q3JEJ8. Positions 31-646.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 323261.Noc_0218.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA56748 ; ABA56748 ; Noc_0218 .
    GeneIDi 3706273.
    KEGGi noc:Noc_0218.
    PATRICi 22704126. VBINitOce57959_0307.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000244643.
    KOi K05343.
    OMAi VNYVRCH.
    OrthoDBi EOG6R87D9.

    Enzyme and pathway databases

    BioCyci NOCE323261:GCI3-222-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR019492. Cyclo-malto-dextrinase_C.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF10438. Cyc-maltodext_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
      Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
      Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19707 / NCIMB 11848Imported.

    Entry informationi

    Entry nameiQ3JEJ8_NITOC
    AccessioniPrimary (citable) accession number: Q3JEJ8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3