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Q3JE88

- Q3JE88_NITOC

UniProt

Q3JE88 - Q3JE88_NITOC

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Protein
Submitted name:

Ribulose 1,5-bisphosphate carboxylase small subunit

Gene

Noc_0332

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-336-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose 1,5-bisphosphate carboxylase small subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Noc_0332Imported
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi323261.Noc_0332.

Structurei

3D structure databases

ProteinModelPortaliQ3JE88.
SMRiQ3JE88. Positions 8-135.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4451.
HOGENOMiHOG000141331.
KOiK01602.
OMAiMFDLKDA.
OrthoDBiEOG6RC3Q7.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3JE88-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMTNHGNRIT QGQFSFLPDL TDEQILAQIK YALKNDWAVN VEYTDDPHPR
60 70 80 90 100
NTYWEMFGIP MFDLKDPAGI MMEINDCRKT YPNHYVRVTA FNSHRGVESP
110 120 130 140
CMSFIVNRPK NEPGFGLVRQ EVDGRHINYT VRSYAADRPE GERYQ
Length:145
Mass (Da):16,935
Last modified:November 8, 2005 - v1
Checksum:i66886402EAD96369
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA56858.1.
RefSeqiWP_011330305.1. NC_007484.1.
YP_342388.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA56858; ABA56858; Noc_0332.
GeneIDi3706503.
KEGGinoc:Noc_0332.
PATRICi22704374. VBINitOce57959_0431.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA56858.1 .
RefSeqi WP_011330305.1. NC_007484.1.
YP_342388.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JE88.
SMRi Q3JE88. Positions 8-135.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0332.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA56858 ; ABA56858 ; Noc_0332 .
GeneIDi 3706503.
KEGGi noc:Noc_0332.
PATRICi 22704374. VBINitOce57959_0431.

Phylogenomic databases

eggNOGi COG4451.
HOGENOMi HOG000141331.
KOi K01602.
OMAi MFDLKDA.
OrthoDBi EOG6RC3Q7.

Enzyme and pathway databases

BioCyci NOCE323261:GCI3-336-MONOMER.

Family and domain databases

Gene3Di 3.30.190.10. 1 hit.
InterProi IPR000894. RuBisCO_sc_dom.
[Graphical view ]
Pfami PF00101. RuBisCO_small. 1 hit.
[Graphical view ]
SMARTi SM00961. RuBisCO_small. 1 hit.
[Graphical view ]
SUPFAMi SSF55239. SSF55239. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848Imported.

Entry informationi

Entry nameiQ3JE88_NITOC
AccessioniPrimary (citable) accession number: Q3JE88
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: October 29, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3