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Q3JE88 (Q3JE88_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ABA56858.1
Gene names
Ordered Locus Names:Noc_0332 EMBL ABA56858.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56858.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length145 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABA56858.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3JE88 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 66886402EAD96369

FASTA14516,935
        10         20         30         40         50         60 
MMTNHGNRIT QGQFSFLPDL TDEQILAQIK YALKNDWAVN VEYTDDPHPR NTYWEMFGIP 

        70         80         90        100        110        120 
MFDLKDPAGI MMEINDCRKT YPNHYVRVTA FNSHRGVESP CMSFIVNRPK NEPGFGLVRQ 

       130        140 
EVDGRHINYT VRSYAADRPE GERYQ 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA56858.1.
RefSeqYP_342388.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JE88.
SMRQ3JE88. Positions 8-135.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0332.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA56858; ABA56858; Noc_0332.
GeneID3706503.
KEGGnoc:Noc_0332.
PATRIC22704374. VBINitOce57959_0431.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141331.
KOK01602.
OMAYIPAVEF.
OrthoDBEOG6RC3Q7.
ProtClustDBCLSK892105.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-336-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JE88_NITOC
AccessionPrimary (citable) accession number: Q3JE88
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: April 16, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)