Q3JE88 (Q3JE88_NITOC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose 1,5-bisphosphate carboxylase small subunit EMBL ABA56858.1
EC=4.1.1.39 EMBL ABA56858.1

Gene names

Ordered Locus Names:

Noc_0332

Organism

Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56858.1

Taxonomic identifier

323261 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus › Nitrosococcus oceani

Protein attributes

Sequence length	145 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABA56858.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3JE88 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 66886402EAD96369	FASTA	145	16,935
	10 20 30 40 50 60 MMTNHGNRIT QGQFSFLPDL TDEQILAQIK YALKNDWAVN VEYTDDPHPR NTYWEMFGIP 70 80 90 100 110 120 MFDLKDPAGI MMEINDCRKT YPNHYVRVTA FNSHRGVESP CMSFIVNRPK NEPGFGLVRQ 130 140 EVDGRHINYT VRSYAADRPE GERYQ

References

[1]

"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707." Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B. Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000127 Genomic DNA. Translation: ABA56858.1.
RefSeq	YP_342388.1. NC_007484.1.
3D structure databases
ProteinModelPortal	Q3JE88.
SMR	Q3JE88. Positions 8-135.
ModBase	Search...
Protein-protein interaction databases
STRING	323261.Noc_0332.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABA56858; ABA56858; Noc_0332.
GeneID	3706503.
KEGG	noc:Noc_0332.
PATRIC	22704374. VBINitOce57959_0431.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4451.
HOGENOM	HOG000141331.
KO	K01602.
OMA	WAVNIEF.
ProtClustDB	CLSK892105.
Family and domain databases
Gene3D	3.30.190.10. 1 hit.
InterPro	IPR000894. RuBisCO_sc_dom. [Graphical view]
Pfam	PF00101. RuBisCO_small. 1 hit. [Graphical view]
SMART	SM00961. RuBisCO_small. 1 hit. [Graphical view]
SUPFAM	SSF55239. RuBisCO_small. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3JE88_NITOC

Accession

Primary (citable) accession number: Q3JE88

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)