Q3JDY7 (Q3JDY7_NITOC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Zinc-containing alcohol dehydrogenase superfamily EMBL ABA56959.1
EC=1.1.1.2 EMBL ABA56959.1

Gene names

Ordered Locus Names:

Noc_0435

Organism

Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA56959.1

Taxonomic identifier

323261 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus

Protein attributes

Sequence length	351 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Zinc By similarity. RuleBase RU000467
Sequence similarities	Belongs to the zinc-containing alcohol dehydrogenase family. RuleBase RU000468

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU000467 Zinc RuleBase RU000467
Molecular function	Oxidoreductase RuleBase RU000467 EMBL ABA56959.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	alcohol dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: EC nucleotide binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3JDY7 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 992748C3428BBAD4	FASTA	351	37,186
	10 20 30 40 50 60 MKAFVMLNIG QVGVVEKDRP TCGPLDAILR PTKGLICTSD VHTVHGAVGE RENLTLGHEA 70 80 90 100 110 120 VGVVEEVGAL VANFKQGDRV AVGAITPDWG SDAAQGGHSS QSGGALGGWK FANIKDGTFA 130 140 150 160 170 180 EYVHVNEADA NLALIPKGVP DESAVYVCDM MSTGFMAAEN AKIPIGGNVV VFAQGPVGLM 190 200 210 220 230 240 CTVGARLQGA GFVIAVESVP KRQELARHFG ADEVVDFTKV DVVERILELT NGEGVDAAID 250 260 270 280 290 300 ALGTSQVLQQ CVKVTKPGGM ISNAGYHGDG EFVEIPRVEW GVGMAEKDIA TGLCPGGHLR 310 320 330 340 350 LSRLLRLLET GRIDPTPMTT HTFGFDEIEK AFRMMEKKED GMIKPMIDFE A

References

[1]

"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707." Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B. Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed: 16957257] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000127 Genomic DNA. Translation: ABA56959.1.
RefSeq	YP_342489.1. NC_007484.1.
3D structure databases
ProteinModelPortal	Q3JDY7.
SMR	Q3JDY7. Positions 1-349.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3JDY7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3706606.
GenomeReviews	Gene locus Noc_0435 in contig CP000127_GR.
KEGG	noc:Noc_0435.
NMPDR	fig|323261.3.peg.957.
PATRIC	22704614. VBINitOce57959_0551.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1063.
HOGENOM	HBG753318.
OMA	PRVEWGC.
PhylomeDB	Q3JDY7.
ProtClustDB	CLSK840511.
Enzyme and pathway databases
BioCyc	NOCE323261:NOC_0435-MONOMER.
Family and domain databases
InterPro	IPR013149. ADH_C. IPR013154. ADH_GroES-like. IPR002085. ADH_SF_Zn-type. IPR002328. ADH_Zn_CS. IPR011032. GroES-like. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHER	PTHR11695. ADH_Sf_Zn. 1 hit.
Pfam	PF08240. ADH_N. 1 hit. PF00107. ADH_zinc_N. 1 hit. [Graphical view]
SUPFAM	SSF50129. GroES_like. 1 hit.
PROSITE	PS00059. ADH_ZINC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3JDY7_NITOC

Accession

Primary (citable) accession number: Q3JDY7

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	December 14, 2011
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)