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Q3JD13

- Q3JD13_NITOC

UniProt

Q3JD13 - Q3JD13_NITOC

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Note: Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei165 – 1651UniRule annotation
Active sitei614 – 6141UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-777-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Noc_0770Imported
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi323261.Noc_0770.

Structurei

3D structure databases

ProteinModelPortaliQ3JD13.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiGIQITIN.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3JD13-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTSMKPQTPE TNPALQDQTG NTTPWRDKEL RARVKLFGNL LGQVIQNQSG
60 70 80 90 100
EKVFAAVEAL RKGYINLRKK ENSDKRIQLL RLIDTLNVEK ITQVVRAFSI
110 120 130 140 150
YFSLANIAEE AYQHRQRQRR IDAGGPLWRG SFEETLRELR KSGISPEQLQ
160 170 180 190 200
IMLDNLAYIP VITAHPTEAK RRTVMEHLRK IFLASKLLDE TRLSQREEET
210 220 230 240 250
LHRQLERQIQ VLWKTDEVRA HRPQVQDEII NGLFYFKVSL FQAVPETYRQ
260 270 280 290 300
LEEAINKVYG DMLPESTTLR VPSFLHFGSW IGGDRDGNPN VTPEVTAMAV
310 320 330 340 350
RLQMRMALQH YIACITKLTR ILTHSIPLIR PSTALTESIN QDLSDCPETF
360 370 380 390 400
RGDPDRFSRE PYRRKLYLMR YRLMDNLRAV ERYLLPEIQP TPPQGVGYPS
410 420 430 440 450
EEKFLEDLCL LRDSLSSHGD GNIAAGELQD LIRLVESFGF YLLKLDVRQE
460 470 480 490 500
SGRHTEAVAE LVKHLDLHPS YLDLSETERL GLLSEQLARE EETTIQRERL
510 520 530 540 550
TPATRETLDL FHVMAQMRQE VSPRVFGHYV ISMTHAASHV MEVMYLGYLA
560 570 580 590 600
GLAGRRRGQW HCGLQISPLF ETIEDLEHIE PVMTALLDDP SYRALLQAAG
610 620 630 640 650
NQQEVMIGYS DSCKDGGILA SSWKLYDAQK KVTGLTDSRG VDCRIFHGRG
660 670 680 690 700
GTIGRGGGPT FDAILSQPQG TVHGQIKFTE QGEVLSSRYS NPETAIYELN
710 720 730 740 750
MGISGLIKAS TCLVQPPQEE KRDYLGIIDS LVETGEQTYR EFTEQTSGFQ
760 770 780 790 800
DYFYEATPVN EIGLLNIGSR PPHRKKGDRS KNSVRAIPWV FGWAQARHTF
810 820 830 840 850
PAWYGIGSAL EKWRAGAPDR LAKLQTMYEE WPYFRALLSN TQMSLAKAEL
860 870 880 890 900
HIAQQYAGLC LDPETGQKIF ALLSAEYQRT VTQVLHIVGA HTLLEENPPL
910 920 930 940 950
ALSLQRRDPY LDPLNHIQLT LLKRTRDPRI TPEEREAWLD PLLRSINAIA

AGMRNTG
Length:957
Mass (Da):109,006
Last modified:November 8, 2005 - v1
Checksum:iF664130E0D8F8A45
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA57283.1.
RefSeqiYP_342813.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA57283; ABA57283; Noc_0770.
GeneIDi3707036.
KEGGinoc:Noc_0770.
PATRICi22705382. VBINitOce57959_0932.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000127 Genomic DNA. Translation: ABA57283.1 .
RefSeqi YP_342813.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JD13.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0770.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA57283 ; ABA57283 ; Noc_0770 .
GeneIDi 3707036.
KEGGi noc:Noc_0770.
PATRICi 22705382. VBINitOce57959_0932.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi GIQITIN.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci NOCE323261:GCI3-777-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848Imported.

Entry informationi

Entry nameiQ3JD13_NITOC
AccessioniPrimary (citable) accession number: Q3JD13
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: November 26, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3