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Q3JD13

- Q3JD13_NITOC

UniProt

Q3JD13 - Q3JD13_NITOC

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, Noc_0770
Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei165 – 1651 By similarityUniRule annotation
Active sitei614 – 6141 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-777-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
Ordered Locus Names:Noc_0770Imported
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi323261.Noc_0770.

Structurei

3D structure databases

ProteinModelPortaliQ3JD13.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiGIQITIN.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3JD13-1 [UniParc]FASTAAdd to Basket

« Hide

MTSMKPQTPE TNPALQDQTG NTTPWRDKEL RARVKLFGNL LGQVIQNQSG    50
EKVFAAVEAL RKGYINLRKK ENSDKRIQLL RLIDTLNVEK ITQVVRAFSI 100
YFSLANIAEE AYQHRQRQRR IDAGGPLWRG SFEETLRELR KSGISPEQLQ 150
IMLDNLAYIP VITAHPTEAK RRTVMEHLRK IFLASKLLDE TRLSQREEET 200
LHRQLERQIQ VLWKTDEVRA HRPQVQDEII NGLFYFKVSL FQAVPETYRQ 250
LEEAINKVYG DMLPESTTLR VPSFLHFGSW IGGDRDGNPN VTPEVTAMAV 300
RLQMRMALQH YIACITKLTR ILTHSIPLIR PSTALTESIN QDLSDCPETF 350
RGDPDRFSRE PYRRKLYLMR YRLMDNLRAV ERYLLPEIQP TPPQGVGYPS 400
EEKFLEDLCL LRDSLSSHGD GNIAAGELQD LIRLVESFGF YLLKLDVRQE 450
SGRHTEAVAE LVKHLDLHPS YLDLSETERL GLLSEQLARE EETTIQRERL 500
TPATRETLDL FHVMAQMRQE VSPRVFGHYV ISMTHAASHV MEVMYLGYLA 550
GLAGRRRGQW HCGLQISPLF ETIEDLEHIE PVMTALLDDP SYRALLQAAG 600
NQQEVMIGYS DSCKDGGILA SSWKLYDAQK KVTGLTDSRG VDCRIFHGRG 650
GTIGRGGGPT FDAILSQPQG TVHGQIKFTE QGEVLSSRYS NPETAIYELN 700
MGISGLIKAS TCLVQPPQEE KRDYLGIIDS LVETGEQTYR EFTEQTSGFQ 750
DYFYEATPVN EIGLLNIGSR PPHRKKGDRS KNSVRAIPWV FGWAQARHTF 800
PAWYGIGSAL EKWRAGAPDR LAKLQTMYEE WPYFRALLSN TQMSLAKAEL 850
HIAQQYAGLC LDPETGQKIF ALLSAEYQRT VTQVLHIVGA HTLLEENPPL 900
ALSLQRRDPY LDPLNHIQLT LLKRTRDPRI TPEEREAWLD PLLRSINAIA 950
AGMRNTG 957
Length:957
Mass (Da):109,006
Last modified:November 8, 2005 - v1
Checksum:iF664130E0D8F8A45
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000127 Genomic DNA. Translation: ABA57283.1.
RefSeqiWP_011330475.1. NC_007484.1.
YP_342813.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA57283; ABA57283; Noc_0770.
GeneIDi3707036.
KEGGinoc:Noc_0770.
PATRICi22705382. VBINitOce57959_0932.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000127 Genomic DNA. Translation: ABA57283.1 .
RefSeqi WP_011330475.1. NC_007484.1.
YP_342813.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JD13.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0770.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA57283 ; ABA57283 ; Noc_0770 .
GeneIDi 3707036.
KEGGi noc:Noc_0770.
PATRICi 22705382. VBINitOce57959_0932.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi GIQITIN.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci NOCE323261:GCI3-777-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848.

Entry informationi

Entry nameiQ3JD13_NITOC
AccessioniPrimary (citable) accession number: Q3JD13
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: September 3, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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