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Q3JD13

- Q3JD13_NITOC

UniProt

Q3JD13 - Q3JD13_NITOC

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei165 – 1651UniRule annotation
    Active sitei614 – 6141UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciNOCE323261:GCI3-777-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotation
    Ordered Locus Names:Noc_0770Imported
    OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
    Taxonomic identifieri323261 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
    ProteomesiUP000006838: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi323261.Noc_0770.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3JD13.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238647.
    KOiK01595.
    OMAiGIQITIN.
    OrthoDBiEOG6TJ7T8.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3JD13-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTSMKPQTPE TNPALQDQTG NTTPWRDKEL RARVKLFGNL LGQVIQNQSG    50
    EKVFAAVEAL RKGYINLRKK ENSDKRIQLL RLIDTLNVEK ITQVVRAFSI 100
    YFSLANIAEE AYQHRQRQRR IDAGGPLWRG SFEETLRELR KSGISPEQLQ 150
    IMLDNLAYIP VITAHPTEAK RRTVMEHLRK IFLASKLLDE TRLSQREEET 200
    LHRQLERQIQ VLWKTDEVRA HRPQVQDEII NGLFYFKVSL FQAVPETYRQ 250
    LEEAINKVYG DMLPESTTLR VPSFLHFGSW IGGDRDGNPN VTPEVTAMAV 300
    RLQMRMALQH YIACITKLTR ILTHSIPLIR PSTALTESIN QDLSDCPETF 350
    RGDPDRFSRE PYRRKLYLMR YRLMDNLRAV ERYLLPEIQP TPPQGVGYPS 400
    EEKFLEDLCL LRDSLSSHGD GNIAAGELQD LIRLVESFGF YLLKLDVRQE 450
    SGRHTEAVAE LVKHLDLHPS YLDLSETERL GLLSEQLARE EETTIQRERL 500
    TPATRETLDL FHVMAQMRQE VSPRVFGHYV ISMTHAASHV MEVMYLGYLA 550
    GLAGRRRGQW HCGLQISPLF ETIEDLEHIE PVMTALLDDP SYRALLQAAG 600
    NQQEVMIGYS DSCKDGGILA SSWKLYDAQK KVTGLTDSRG VDCRIFHGRG 650
    GTIGRGGGPT FDAILSQPQG TVHGQIKFTE QGEVLSSRYS NPETAIYELN 700
    MGISGLIKAS TCLVQPPQEE KRDYLGIIDS LVETGEQTYR EFTEQTSGFQ 750
    DYFYEATPVN EIGLLNIGSR PPHRKKGDRS KNSVRAIPWV FGWAQARHTF 800
    PAWYGIGSAL EKWRAGAPDR LAKLQTMYEE WPYFRALLSN TQMSLAKAEL 850
    HIAQQYAGLC LDPETGQKIF ALLSAEYQRT VTQVLHIVGA HTLLEENPPL 900
    ALSLQRRDPY LDPLNHIQLT LLKRTRDPRI TPEEREAWLD PLLRSINAIA 950
    AGMRNTG 957
    Length:957
    Mass (Da):109,006
    Last modified:November 8, 2005 - v1
    Checksum:iF664130E0D8F8A45
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57283.1.
    RefSeqiWP_011330475.1. NC_007484.1.
    YP_342813.1. NC_007484.1.

    Genome annotation databases

    EnsemblBacteriaiABA57283; ABA57283; Noc_0770.
    GeneIDi3707036.
    KEGGinoc:Noc_0770.
    PATRICi22705382. VBINitOce57959_0932.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57283.1 .
    RefSeqi WP_011330475.1. NC_007484.1.
    YP_342813.1. NC_007484.1.

    3D structure databases

    ProteinModelPortali Q3JD13.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 323261.Noc_0770.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA57283 ; ABA57283 ; Noc_0770 .
    GeneIDi 3707036.
    KEGGi noc:Noc_0770.
    PATRICi 22705382. VBINitOce57959_0932.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238647.
    KOi K01595.
    OMAi GIQITIN.
    OrthoDBi EOG6TJ7T8.

    Enzyme and pathway databases

    BioCyci NOCE323261:GCI3-777-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
      Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
      Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19707 / NCIMB 11848Imported.

    Entry informationi

    Entry nameiQ3JD13_NITOC
    AccessioniPrimary (citable) accession number: Q3JD13
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3