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Q3JD12

- GLGA2_NITOC

UniProt

Q3JD12 - GLGA2_NITOC

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Protein

Glycogen synthase 2

Gene

glgA2

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei16 – 161ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciNOCE323261:GCI3-778-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase 2UniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthase 2UniRule annotation
Gene namesi
Name:glgA2UniRule annotation
Ordered Locus Names:Noc_0771
OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Taxonomic identifieri323261 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
ProteomesiUP000006838: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 491491Glycogen synthase 2PRO_0000230249Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi323261.Noc_0771.

Structurei

3D structure databases

ProteinModelPortaliQ3JD12.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiPYHDESQ.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3JD12-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MYKILFATSE AHPLIKTGGL GDVAGILPIE LARLGLEAGI ILPAYPACKT
60 70 80 90 100
HLKNLKEVAR LRLPAALEPV RILKGQLLEG PNPVWLVDSP AHFDRPGNPY
110 120 130 140 150
LNEQGQDWPD NAARFTTFCR AVATLANSPE FDWQPDLIHC NDWQTGLIPP
160 170 180 190 200
FLAPLRSRPA TLFTIHNLAY QGVFSRQQFD ALELPSAWWS PAALEFYNQI
210 220 230 240 250
SFIKGGLVFA DWLTTVSPTY AKEILTPEFG CGLDGVLRGR SKRLTGILNG
260 270 280 290 300
ADYQRWDPRH DPFIEKRYDQ TCWSHKASNK LALQRRYGLP EDDTLPVLGF
310 320 330 340 350
VGRLVEQKGI DLILGALPKL LAEKIQVVFL GEGEERHQNA LQQLASRYPN
360 370 380 390 400
QIGVSISYDE RLAHGVQAGA DIFLMPSRFE PCGLTQLYAL RYGTVPIARR
410 420 430 440 450
TGGLSDTIVD ATEKNLRQEL ATGFTFTESS PSALLTAIQR ALACYAQSRQ
460 470 480 490
WRRLALTGMA QNFSWQTSAK AYFDLYQQLV SQEFSCKNNV L
Length:491
Mass (Da):54,828
Last modified:November 8, 2005 - v1
Checksum:i1400C097AD5DAA6E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000127 Genomic DNA. Translation: ABA57284.1.
RefSeqiYP_342814.1. NC_007484.1.

Genome annotation databases

EnsemblBacteriaiABA57284; ABA57284; Noc_0771.
GeneIDi3707037.
KEGGinoc:Noc_0771.
PATRICi22705384. VBINitOce57959_0933.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000127 Genomic DNA. Translation: ABA57284.1 .
RefSeqi YP_342814.1. NC_007484.1.

3D structure databases

ProteinModelPortali Q3JD12.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 323261.Noc_0771.

Protein family/group databases

CAZyi GT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABA57284 ; ABA57284 ; Noc_0771 .
GeneIDi 3707037.
KEGGi noc:Noc_0771.
PATRICi 22705384. VBINitOce57959_0933.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294941.
KOi K00703.
OMAi PYHDESQ.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci NOCE323261:GCI3-778-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
    Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
    Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19707 / NCIMB 11848.

Entry informationi

Entry nameiGLGA2_NITOC
AccessioniPrimary (citable) accession number: Q3JD12
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 8, 2005
Last modified: October 1, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3