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Q3JD12 (GLGA2_NITOC) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase 2

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase 2
Gene names
Name:glgA2
Ordered Locus Names:Noc_0771
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP]
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length491 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 491491Glycogen synthase 2 HAMAP-Rule MF_00484
PRO_0000230249

Sites

Binding site161ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q3JD12 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 1400C097AD5DAA6E

FASTA49154,828
        10         20         30         40         50         60 
MYKILFATSE AHPLIKTGGL GDVAGILPIE LARLGLEAGI ILPAYPACKT HLKNLKEVAR 

        70         80         90        100        110        120 
LRLPAALEPV RILKGQLLEG PNPVWLVDSP AHFDRPGNPY LNEQGQDWPD NAARFTTFCR 

       130        140        150        160        170        180 
AVATLANSPE FDWQPDLIHC NDWQTGLIPP FLAPLRSRPA TLFTIHNLAY QGVFSRQQFD 

       190        200        210        220        230        240 
ALELPSAWWS PAALEFYNQI SFIKGGLVFA DWLTTVSPTY AKEILTPEFG CGLDGVLRGR 

       250        260        270        280        290        300 
SKRLTGILNG ADYQRWDPRH DPFIEKRYDQ TCWSHKASNK LALQRRYGLP EDDTLPVLGF 

       310        320        330        340        350        360 
VGRLVEQKGI DLILGALPKL LAEKIQVVFL GEGEERHQNA LQQLASRYPN QIGVSISYDE 

       370        380        390        400        410        420 
RLAHGVQAGA DIFLMPSRFE PCGLTQLYAL RYGTVPIARR TGGLSDTIVD ATEKNLRQEL 

       430        440        450        460        470        480 
ATGFTFTESS PSALLTAIQR ALACYAQSRQ WRRLALTGMA QNFSWQTSAK AYFDLYQQLV 

       490 
SQEFSCKNNV L 

« Hide

References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA57284.1.
RefSeqYP_342814.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JD12.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0771.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA57284; ABA57284; Noc_0771.
GeneID3707037.
KEGGnoc:Noc_0771.
PATRIC22705384. VBINitOce57959_0933.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-778-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA2_NITOC
AccessionPrimary (citable) accession number: Q3JD12
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways