Reviewed, UniProtKB/Swiss-Prot Q3JD12 (GLGA2_NITOC)

Names and origin

Protein names

Recommended name:
    Glycogen synthase 2
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase 2

Gene names

Name:	glgA2
Ordered Locus Names:	Noc_0771

Organism

Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP]

Taxonomic identifier

323261 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Nitrosococcus

Protein attributes

Sequence length	491 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose. HAMAP MF_00484
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 491	491	Glycogen synthase 2 HAMAP MF_00484		PRO_0000230249
Sites
	Binding site	16	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q3JD12-1 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 1400C097AD5DAA6E	FASTA	491	54,828
	10 20 30 40 50 60 MYKILFATSE AHPLIKTGGL GDVAGILPIE LARLGLEAGI ILPAYPACKT HLKNLKEVAR 70 80 90 100 110 120 LRLPAALEPV RILKGQLLEG PNPVWLVDSP AHFDRPGNPY LNEQGQDWPD NAARFTTFCR 130 140 150 160 170 180 AVATLANSPE FDWQPDLIHC NDWQTGLIPP FLAPLRSRPA TLFTIHNLAY QGVFSRQQFD 190 200 210 220 230 240 ALELPSAWWS PAALEFYNQI SFIKGGLVFA DWLTTVSPTY AKEILTPEFG CGLDGVLRGR 250 260 270 280 290 300 SKRLTGILNG ADYQRWDPRH DPFIEKRYDQ TCWSHKASNK LALQRRYGLP EDDTLPVLGF 310 320 330 340 350 360 VGRLVEQKGI DLILGALPKL LAEKIQVVFL GEGEERHQNA LQQLASRYPN QIGVSISYDE 370 380 390 400 410 420 RLAHGVQAGA DIFLMPSRFE PCGLTQLYAL RYGTVPIARR TGGLSDTIVD ATEKNLRQEL 430 440 450 460 470 480 ATGFTFTESS PSALLTAIQR ALACYAQSRQ WRRLALTGMA QNFSWQTSAK AYFDLYQQLV 490 SQEFSCKNNV L

References

[1]

"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707." Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B. Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed: 16957257] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000127 Genomic DNA. Translation: ABA57284.1.
RefSeq	YP_342814.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	Q3JD12.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Genome annotation databases
GeneID	3707037.
GenomeReviews	Gene locus Noc_0771 in contig CP000127_GR.
KEGG	noc:Noc_0771.
NMPDR	fig|323261.3.peg.53.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q3JD12.
OMA	YQGPWRW.
Enzyme and pathway databases
BioCyc	NOCE323261:NOC_0771-MON.
Family and domain databases
HAMAP	MF_00484. [Tree]
InterPro	IPR011835. GlgA. IPR001296. Glyco_trans_1. IPR013534. Glyco_transf_5. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA2_NITOC

Accession

Primary (citable) accession number: Q3JD12

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	November 8, 2005
Last modified:	November 3, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)