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Q3JD12

- GLGA2_NITOC

UniProt

Q3JD12 - GLGA2_NITOC

Protein

Glycogen synthase 2

Gene

glgA2

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei16 – 161ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciNOCE323261:GCI3-778-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthase 2UniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthase 2UniRule annotation
    Gene namesi
    Name:glgA2UniRule annotation
    Ordered Locus Names:Noc_0771
    OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
    Taxonomic identifieri323261 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
    ProteomesiUP000006838: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 491491Glycogen synthase 2PRO_0000230249Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi323261.Noc_0771.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3JD12.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294941.
    KOiK00703.
    OMAiPYHDESQ.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q3JD12-1 [UniParc]FASTAAdd to Basket

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    MYKILFATSE AHPLIKTGGL GDVAGILPIE LARLGLEAGI ILPAYPACKT    50
    HLKNLKEVAR LRLPAALEPV RILKGQLLEG PNPVWLVDSP AHFDRPGNPY 100
    LNEQGQDWPD NAARFTTFCR AVATLANSPE FDWQPDLIHC NDWQTGLIPP 150
    FLAPLRSRPA TLFTIHNLAY QGVFSRQQFD ALELPSAWWS PAALEFYNQI 200
    SFIKGGLVFA DWLTTVSPTY AKEILTPEFG CGLDGVLRGR SKRLTGILNG 250
    ADYQRWDPRH DPFIEKRYDQ TCWSHKASNK LALQRRYGLP EDDTLPVLGF 300
    VGRLVEQKGI DLILGALPKL LAEKIQVVFL GEGEERHQNA LQQLASRYPN 350
    QIGVSISYDE RLAHGVQAGA DIFLMPSRFE PCGLTQLYAL RYGTVPIARR 400
    TGGLSDTIVD ATEKNLRQEL ATGFTFTESS PSALLTAIQR ALACYAQSRQ 450
    WRRLALTGMA QNFSWQTSAK AYFDLYQQLV SQEFSCKNNV L 491
    Length:491
    Mass (Da):54,828
    Last modified:November 8, 2005 - v1
    Checksum:i1400C097AD5DAA6E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57284.1.
    RefSeqiYP_342814.1. NC_007484.1.

    Genome annotation databases

    EnsemblBacteriaiABA57284; ABA57284; Noc_0771.
    GeneIDi3707037.
    KEGGinoc:Noc_0771.
    PATRICi22705384. VBINitOce57959_0933.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57284.1 .
    RefSeqi YP_342814.1. NC_007484.1.

    3D structure databases

    ProteinModelPortali Q3JD12.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 323261.Noc_0771.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA57284 ; ABA57284 ; Noc_0771 .
    GeneIDi 3707037.
    KEGGi noc:Noc_0771.
    PATRICi 22705384. VBINitOce57959_0933.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294941.
    KOi K00703.
    OMAi PYHDESQ.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci NOCE323261:GCI3-778-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
      Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
      Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19707 / NCIMB 11848.

    Entry informationi

    Entry nameiGLGA2_NITOC
    AccessioniPrimary (citable) accession number: Q3JD12
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 4, 2006
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3