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Q3JCZ0

- Q3JCZ0_NITOC

UniProt

Q3JCZ0 - Q3JCZ0_NITOC

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Protein
Peptide chain release factor 2
Gene
prfB, Noc_0793
Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA By similarity.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. translation release factor activity, codon specific Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Biological processi

    Protein biosynthesisUniRule annotationSAAS annotations

    Enzyme and pathway databases

    BioCyciNOCE323261:GCI3-800-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Peptide chain release factor 2UniRule annotation
    Short name:
    RF-2UniRule annotation
    Gene namesi
    Name:prfBUniRule annotation
    Ordered Locus Names:Noc_0793Imported
    OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
    Taxonomic identifieri323261 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
    ProteomesiUP000006838: Chromosome

    Subcellular locationi

    Cytoplasm By similarity UniRule annotationSAAS annotations

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    Complete GO annotation...

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotations

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei218 – 2181N5-methylglutamine By similarityUniRule annotation

    Post-translational modificationi

    Methylated by PrmC. Methylation increases the termination efficiency of RF2 By similarity.UniRule annotation

    Keywords - PTMi

    MethylationUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi323261.Noc_0793.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3JCZ0.
    SMRiQ3JCZ0. Positions 2-331.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG1186.
    HOGENOMiHOG000074814.
    KOiK02836.
    OMAiHEVGNIT.
    OrthoDBiEOG6TN48J.

    Family and domain databases

    Gene3Di3.30.160.20. 1 hit.
    HAMAPiMF_00094. Rel_fac_2.
    InterProiIPR014720. dsRNA-bd_dom.
    IPR005139. PCRF.
    IPR000352. Pep_chain_release_fac_I_II.
    IPR020853. Peptide_chain_release_fac2_bac.
    IPR004374. PrfB.
    [Graphical view]
    PANTHERiPTHR11075:SF6. PTHR11075:SF6. 1 hit.
    PfamiPF03462. PCRF. 1 hit.
    PF00472. RF-1. 1 hit.
    [Graphical view]
    SMARTiSM00937. PCRF. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00020. prfB. 1 hit.
    PROSITEiPS00745. RF_PROK_I. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3JCZ0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MEVDRELAVP SVWDEPERAQ QLGQERAQLQ SVVAPLAELG GEIIQVRELF    50
    ELAMEEGDED TAQEIIAELD VVEQRLAKLE FQRMFAGEMD PNNAYLDIQA 100
    GSGGTEAQDW ANMLLRMYLR WGEKHSFKTE LTEVSEGEVA GIKSAAIRFE 150
    GEYAFGWLRT ETGVHRLVRK SPFDSGNRRH TSFASVFVYP EVDERIDIEI 200
    NPADLRIDTY RASGAGGQHV NRTDSAVRIT HLPSSLVVQC QSERSQHQNK 250
    AHAMAQLRAK LYELEMRNRQ AEKQAAEEAK ADIGWGSQIR NYVLDQSRIK 300
    DLRTGIEVGN TQGVLDGDLD SFIEASLKSG F 331
    Length:331
    Mass (Da):37,196
    Last modified:November 8, 2005 - v1
    Checksum:i205FC5F0C158A58D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57306.1.
    RefSeqiYP_342836.1. NC_007484.1.

    Genome annotation databases

    EnsemblBacteriaiABA57306; ABA57306; Noc_0793.
    GeneIDi3707059.
    KEGGinoc:Noc_0793.
    PATRICi22705436. VBINitOce57959_0959.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57306.1 .
    RefSeqi YP_342836.1. NC_007484.1.

    3D structure databases

    ProteinModelPortali Q3JCZ0.
    SMRi Q3JCZ0. Positions 2-331.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 323261.Noc_0793.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA57306 ; ABA57306 ; Noc_0793 .
    GeneIDi 3707059.
    KEGGi noc:Noc_0793.
    PATRICi 22705436. VBINitOce57959_0959.

    Phylogenomic databases

    eggNOGi COG1186.
    HOGENOMi HOG000074814.
    KOi K02836.
    OMAi HEVGNIT.
    OrthoDBi EOG6TN48J.

    Enzyme and pathway databases

    BioCyci NOCE323261:GCI3-800-MONOMER.

    Family and domain databases

    Gene3Di 3.30.160.20. 1 hit.
    HAMAPi MF_00094. Rel_fac_2.
    InterProi IPR014720. dsRNA-bd_dom.
    IPR005139. PCRF.
    IPR000352. Pep_chain_release_fac_I_II.
    IPR020853. Peptide_chain_release_fac2_bac.
    IPR004374. PrfB.
    [Graphical view ]
    PANTHERi PTHR11075:SF6. PTHR11075:SF6. 1 hit.
    Pfami PF03462. PCRF. 1 hit.
    PF00472. RF-1. 1 hit.
    [Graphical view ]
    SMARTi SM00937. PCRF. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00020. prfB. 1 hit.
    PROSITEi PS00745. RF_PROK_I. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
      Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
      Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19707 / NCIMB 11848.

    Entry informationi

    Entry nameiQ3JCZ0_NITOC
    AccessioniPrimary (citable) accession number: Q3JCZ0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: June 11, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    External Data

    Dasty 3

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