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Q3JCV3 (Q3JCV3_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1104 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3JCV3 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: A87131B0D8403738

FASTA1,104128,165
        10         20         30         40         50         60 
MNPRGEELAW QDDPLWYKDA IIYQLHVRAF FDSNNDGTGD FRGLTQKLDY IQDLGVNAIW 

        70         80         90        100        110        120 
LLPFYPSPLR DDGYDIADYR NIYPDYGTRR DVRHFVREAH RRGLKVITEL VINHTSDQHP 

       130        140        150        160        170        180 
WFQAARRAPP GSAKRDFYVW SDTDQKFPET RIIFTDTETS NWAWDPVAKA YYWHRFFSHQ 

       190        200        210        220        230        240 
PDLNHNNPQV VRAVIRVMRF WLDMGVDGLR LDAIPYLCVR EGTHNENLPE SHEVLKEMRA 

       250        260        270        280        290        300 
VVDEHYQGRM FLAEANQWPE DVREYFGDGD ECHMAYHFPL MPRMYMAIAQ EDRHPITEIM 

       310        320        330        340        350        360 
NQTPDIPQTC QWAIFLRNHD ELTLEMVTDK ERDYMYQSYA ANPRMRVNVG IRRRLAPLMD 

       370        380        390        400        410        420 
NDLDKIRLMN SLLFSMPGSP IIYYGDEIGM GDNIYLGDRN SVRTPMQWSP DRNAGFSKTD 

       430        440        450        460        470        480 
PQRLFLPPIM DPIYGYEGVN VEAQSRAPSS LLNWMKRLLA VRKSIKTFGR GTLAFLRPGN 

       490        500        510        520        530        540 
RKILAYVREW EGEAILCVAN LSRCAQPVEL DLSRFEGRVP LELMGHTPFP PIGELPYLLT 

       550        560        570        580        590        600 
LPGHGFYWFR LAMDVAEPAW HEQRSPPAEL PVLVLFDGWD SLFPERVDPS RQRMAEKLGR 

       610        620        630        640        650        660 
QLEQALGDFL LAQRWFAAKG EKIERIALEQ MEELGNWLLA RVRVEFTESE AQSYFIPLAI 

       670        680        690        700        710        720 
AWGEGDEEPI RRLLPATIAK IRRQARLGIL YDALEDINFS QALVMAMGQH REILFGAGRL 

       730        740        750        760        770        780 
KFSPTTAFEK LVYSASLEQL RRPAVEGTNS TLILDNRLFL KIYRYLEEGI NSEREIGYFL 

       790        800        810        820        830        840 
TEISPFPHIA PLAGTLEYIS PKEKVITLAL LQGFVSNQGD AWAYTVAYLE RFLEHCLAKP 

       850        860        870        880        890        900 
LEEVATELDK NHEDYLRKIT LLGRRTGELH QALAKETGNP AFDPEPIVSA DLISWRKRLE 

       910        920        930        940        950        960 
ADIECTFKKL AQRKNTFPES LRNDVEWFLR SGEILRQRLC LNSSILQTVK TRYHGDYHLG 

       970        980        990       1000       1010       1020 
QVLVAEDDLV IIDFEGEPAR PLRERRKKHS PLRDVAGMLR SFNYAAVVAL RHCTAERPED 

      1030       1040       1050       1060       1070       1080 
QVLLMPLLHA WEQQAREYFL TGYREGMRDC PSYPVDSEQA HDLITLFTLE KALYELRYEL 

      1090       1100 
DNRPAWVEVP LRGLLAFLEE DEQK 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA57343.1.
RefSeqYP_342873.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JCV3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_0830.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA57343; ABA57343; Noc_0830.
GeneID3707135.
KEGGnoc:Noc_0830.
PATRIC22705510. VBINitOce57959_0996.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000268420.
KOK05343.
OMAGTRIIFT.
OrthoDBEOG6RVFV2.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-837-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JCV3_NITOC
AccessionPrimary (citable) accession number: Q3JCV3
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)