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Q3JBI1 (Q3JBI1_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.3.32 EMBL ABA57815.1
Gene names
Ordered Locus Names:Noc_1317 EMBL ABA57815.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA57815.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length556 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABA57815.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_function2,3-dimethylmalate lyase activity

Inferred from electronic annotation. Source: UniProtKB-EC

phosphoenolpyruvate mutase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q3JBI1 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: C01B81CEB6874009

FASTA55661,569
        10         20         30         40         50         60 
MSTVPLPTAG TFKRRPSKFA QLRALLKSEP TEFLLEAHNG LSARIAEEAG FKGVWASGLA 

        70         80         90        100        110        120 
ISSQFGVRDN NEASWTQIVD MLEFMSDTTT IPILLDGDTG YGNFNNLRRL VRKLEQREIA 

       130        140        150        160        170        180 
GVCIEDKVFP KTNSFIGGER QPLAEVDEFC GKIKAGKDSQ SDPDFSIVAR VEALIAGWGL 

       190        200        210        220        230        240 
DEALRRAEAY HRAGADAILI HSKLSQADEI LAFAREWGNR APLIIVPTKY YSTPTEVFRK 

       250        260        270        280        290        300 
AGISTVIWAN HLIRAAAAAM AQVAREIHDT QTLVNIEDQV APVSEIFRLQ GAEELLAAER 

       310        320        330        340        350        360 
RYGASPEAET GAIVLGATRG KGLESLTQDR PKVMLPVAGI PLLRRLVDEF KRQHVNRITV 

       370        380        390        400        410        420 
VTGYKPEAID VKAISLIHNP DYGHSSELSS LACALESLSE DTIITYGDLL FRSYILNDLR 

       430        440        450        460        470        480 
HVPGNIVVVV DSALSPGMKD DIRDVAFCSQ PDDRSLFRQD VDLLRIETQK KQLSKQPHGR 

       490        500        510        520        530        540 
WIGMARVAGE GRQWLLDALQ ALRQQENFSQ LAMPDLFNHL VANGHPIKVL YINGHWLDVN 

       550 
DMEDLTRAGD FAHGHQ 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA57815.1.
RefSeqYP_343345.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3JBI1.
SMRQ3JBI1. Positions 18-302.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_1317.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA57815; ABA57815; Noc_1317.
GeneID3706254.
KEGGnoc:Noc_1317.
PATRIC22706660. VBINitOce57959_1559.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2513.
HOGENOMHOG000171929.
KOK01841.
OMADFAWCSA.
OrthoDBEOG6N947Q.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-1337-MONOMER.

Family and domain databases

Gene3D3.20.20.60. 1 hit.
3.90.550.10. 1 hit.
InterProIPR025877. MobA-like_NTP_Trfase_dom.
IPR029044. Nucleotide-diphossugar_trans.
IPR012698. PEnolPyrv_PMutase_core.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF12804. NTP_transf_3. 1 hit.
[Graphical view]
SUPFAMSSF51621. SSF51621. 1 hit.
SSF53448. SSF53448. 1 hit.
TIGRFAMsTIGR02320. PEP_mutase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JBI1_NITOC
AccessionPrimary (citable) accession number: Q3JBI1
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: June 11, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)