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Q3JBI1

- Q3JBI1_NITOC

UniProt

Q3JBI1 - Q3JBI1_NITOC

Protein
Submitted name:

2,3-dimethylmalate lyase

Gene

Noc_1317

Organism
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 51 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 2,3-dimethylmalate lyase activity Source: UniProtKB-EC
    2. phosphoenolpyruvate mutase activity Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciNOCE323261:GCI3-1337-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2,3-dimethylmalate lyaseImported (EC:4.1.3.32Imported)
    Gene namesi
    Ordered Locus Names:Noc_1317Imported
    OrganismiNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)Imported
    Taxonomic identifieri323261 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus
    ProteomesiUP000006838: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi323261.Noc_1317.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3JBI1.
    SMRiQ3JBI1. Positions 18-302.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2513.
    HOGENOMiHOG000171929.
    KOiK01841.
    OMAiDFAWCSA.
    OrthoDBiEOG6N947Q.

    Family and domain databases

    Gene3Di3.20.20.60. 1 hit.
    3.90.550.10. 1 hit.
    InterProiIPR025877. MobA-like_NTP_Trfase_dom.
    IPR029044. Nucleotide-diphossugar_trans.
    IPR012698. PEnolPyrv_PMutase_core.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF12804. NTP_transf_3. 1 hit.
    [Graphical view]
    SUPFAMiSSF51621. SSF51621. 1 hit.
    SSF53448. SSF53448. 1 hit.
    TIGRFAMsiTIGR02320. PEP_mutase. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q3JBI1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTVPLPTAG TFKRRPSKFA QLRALLKSEP TEFLLEAHNG LSARIAEEAG    50
    FKGVWASGLA ISSQFGVRDN NEASWTQIVD MLEFMSDTTT IPILLDGDTG 100
    YGNFNNLRRL VRKLEQREIA GVCIEDKVFP KTNSFIGGER QPLAEVDEFC 150
    GKIKAGKDSQ SDPDFSIVAR VEALIAGWGL DEALRRAEAY HRAGADAILI 200
    HSKLSQADEI LAFAREWGNR APLIIVPTKY YSTPTEVFRK AGISTVIWAN 250
    HLIRAAAAAM AQVAREIHDT QTLVNIEDQV APVSEIFRLQ GAEELLAAER 300
    RYGASPEAET GAIVLGATRG KGLESLTQDR PKVMLPVAGI PLLRRLVDEF 350
    KRQHVNRITV VTGYKPEAID VKAISLIHNP DYGHSSELSS LACALESLSE 400
    DTIITYGDLL FRSYILNDLR HVPGNIVVVV DSALSPGMKD DIRDVAFCSQ 450
    PDDRSLFRQD VDLLRIETQK KQLSKQPHGR WIGMARVAGE GRQWLLDALQ 500
    ALRQQENFSQ LAMPDLFNHL VANGHPIKVL YINGHWLDVN DMEDLTRAGD 550
    FAHGHQ 556
    Length:556
    Mass (Da):61,569
    Last modified:November 8, 2005 - v1
    Checksum:iC01B81CEB6874009
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57815.1.
    RefSeqiYP_343345.1. NC_007484.1.

    Genome annotation databases

    EnsemblBacteriaiABA57815; ABA57815; Noc_1317.
    GeneIDi3706254.
    KEGGinoc:Noc_1317.
    PATRICi22706660. VBINitOce57959_1559.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000127 Genomic DNA. Translation: ABA57815.1 .
    RefSeqi YP_343345.1. NC_007484.1.

    3D structure databases

    ProteinModelPortali Q3JBI1.
    SMRi Q3JBI1. Positions 18-302.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 323261.Noc_1317.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA57815 ; ABA57815 ; Noc_1317 .
    GeneIDi 3706254.
    KEGGi noc:Noc_1317.
    PATRICi 22706660. VBINitOce57959_1559.

    Phylogenomic databases

    eggNOGi COG2513.
    HOGENOMi HOG000171929.
    KOi K01841.
    OMAi DFAWCSA.
    OrthoDBi EOG6N947Q.

    Enzyme and pathway databases

    BioCyci NOCE323261:GCI3-1337-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.60. 1 hit.
    3.90.550.10. 1 hit.
    InterProi IPR025877. MobA-like_NTP_Trfase_dom.
    IPR029044. Nucleotide-diphossugar_trans.
    IPR012698. PEnolPyrv_PMutase_core.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF12804. NTP_transf_3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51621. SSF51621. 1 hit.
    SSF53448. SSF53448. 1 hit.
    TIGRFAMsi TIGR02320. PEP_mutase. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
      Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
      Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19707 / NCIMB 11848Imported.

    Entry informationi

    Entry nameiQ3JBI1_NITOC
    AccessioniPrimary (citable) accession number: Q3JBI1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 51 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3