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Q3JAJ4 (Q3JAJ4_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.4.99.15 EMBL ABA58152.1
Gene names
Ordered Locus Names:Noc_1680 EMBL ABA58152.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA58152.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length940 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q3JAJ4 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: C7D0D233A9C5866E

FASTA940108,871
        10         20         30         40         50         60 
MSHCYASPYL KARSGSPHGY DIVDHNALNP EIGDEETFSS WISALRHHGM GQILDIVPNH 

        70         80         90        100        110        120 
MGVGGNDNVW WLDVLEHGPA SEYAGYFDID WRPIKEELRG KVLLPLLGDH YGKVLEKGEL 

       130        140        150        160        170        180 
ALAFDLERGE FSLYFYHHRF PIDPNTYPDI LGYQVERLAD HFSEEEVSFL EYQSLITAFQ 

       190        200        210        220        230        240 
HLPSRHDTNA EKRVERLRDC AIYKRRLAES CRKYPAIGAF VLDTVAAFNG VAEQPESFDR 

       250        260        270        280        290        300 
LHHLLERQAY RLAYWRVAAD EINYRRFFDI NDLAGLRMEN QAVFETTHRF ILELVKKGEV 

       310        320        330        340        350        360 
DGLRIDHPDG LYDPLRYYQH LNQKITEIKG EDEDKENNFP HKTSKPNYYL VIEKILASYE 

       370        380        390        400        410        420 
YLPENWPVCG TSGYEFSSLN NGLFIYPSSQ KEFEQLYSRF IGHSWDFDQL LYERKKIIIR 

       430        440        450        460        470        480 
VQLSSELTVL ANRLNSIAQK DRHTRDFTLN GLREALTEVV ACFPVYRTYV ARNQVSEEDK 

       490        500        510        520        530        540 
RFVQWAVAQA KKRSPAADIS ILDFIQAILL LETSLRSELS EEIISFVMRF QQYTGPVMAK 

       550        560        570        580        590        600 
ALEDTALYIY NYLVSLNDVG SDPRNFGVSL SSFHRANQER AQRWPYGMVT SSTHDSKRSE 

       610        620        630        640        650        660 
DVRARLNVLS EIPGEWRKRL SRWTRINRSK VRRLNGFRAP SRNDEYLFYQ TVLGTWPLLG 

       670        680        690        700        710        720 
MSEEGLVDFQ GRIEAYMLKA IKEAKVHTSW INPDVEYETA VVHFVRNVLG NLEKNPFLLD 

       730        740        750        760        770        780 
FIPFQKRVAG FGLLNGLSQL LLKLTVPGVP DIYQGNELWE FQLVDPDNRH PVDFVLRQRM 

       790        800        810        820        830        840 
LQHLMLLTHS KQPLKSHTYE LLRTKEDSLV KLYLTWKTLS FRAKFPLLFE KGDYTSLSVQ 

       850        860        870        880        890        900 
GTKAEHLCAF ARRHQDKIVL SITPRWFALL GSNGDGLPLG ESLWKGTWVE IPEVNGHKKF 

       910        920        930        940 
TNVLTDEIVT IVQDKGKNYI PANKLFESFS VALLFSLRSF 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA58152.1.
RefSeqYP_343682.1. NC_007484.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_1680.

Protein family/group databases

CAZyGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA58152; ABA58152; Noc_1680.
GeneID3705626.
KEGGnoc:Noc_1680.
PATRIC22707552. VBINitOce57959_2000.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3280.
HOGENOMHOG000248560.
KOK06044.
OMALVGCWPP.
OrthoDBEOG6GBM7P.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-1704-MONOMER.

Family and domain databases

Gene3D1.10.10.470. 1 hit.
3.20.20.80. 5 hits.
InterProIPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013797. Maltooligo_trehalose_synth_N.
IPR012767. Trehalose_TreY.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 3 hits.
TIGRFAMsTIGR02401. trehalose_TreY. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3JAJ4_NITOC
AccessionPrimary (citable) accession number: Q3JAJ4
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)