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Q3J6X5 (Q3J6X5_NITOC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 60. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.3.3 EMBL ABA59421.1
Gene names
Ordered Locus Names:Noc_2979 EMBL ABA59421.1
OrganismNitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) [Complete proteome] [HAMAP] EMBL ABA59421.1
Taxonomic identifier323261 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeNitrosococcus

Protein attributes

Sequence length754 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3J6X5 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 90EC26F62570C569

FASTA75485,946
        10         20         30         40         50         60 
MLIGEDTEMP VNKRKEEQNC DLLWALLNNA ADGIIVIDEE GRIILTNTAT EHFFGYRQQE 

        70         80         90        100        110        120 
MIGQDMRKLI PDYDKCLTDH EKIISSEREV TGRRKDGNTF LAHLSISEIQ HGGQRLFAGV 

       130        140        150        160        170        180 
IRDFTTHKQG EIDAQRLAAI VESSEDAIIS KTLDGIVISW NSAAQRIYGY SAEEICGQSI 

       190        200        210        220        230        240 
SILAPPDRAD EIPQILQHIR RGERIKQFET VRMRKDGREM FVSLTISPIK NSQGSITGAA 

       250        260        270        280        290        300 
TIARDITRRK QREEKLLWLS RALEQSPVAV TITDTAGNIQ YVNAKFTQLT GYHREEIIGR 

       310        320        330        340        350        360 
NPRILQSGKT SLEEYQQLWS TIISGREWRG EIQDKKKNGE IYWILEQISP IKNTQGEITH 

       370        380        390        400        410        420 
FLAIEEDISE RKQIEKALQE SEERFRQVAK MTGEWIWERD SSGRFIYCSG AVKEILGYEP 

       430        440        450        460        470        480 
KEMFGKHYSE FFTLEAQEGK PCKSPQSGKR FFRIVCCYRH KDGREVFTES SGEPLLDERG 

       490        500        510        520        530        540 
QIVKWRGLDR DITKRLEAQE LIRRAQISLA VTRNELRIAQ QIQESLLPTE SLVLPEVQVV 

       550        560        570        580        590        600 
GHCLPASQVG GDYFDYYYRQ SDNTVDVTIA DVSGHSVGPA LFMVETRSAL KTQIRSKFTA 

       610        620        630        640        650        660 
ANTLAALNDS LYEDLNGADH FITMFYMQYH IATGEINYAS AGHNPPLLLR RNEAVCNKLE 

       670        680        690        700        710        720 
ADGLIFGVKK EVSFEEKRTF LKKGDLVFLY TDGIVEAESK QGEFFGIHRL SKILVTHRHL 

       730        740        750 
AAQELIKVIV KDLQGFCESK NFRDDATMVI LKVM 

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References

[1]"Complete genome sequence of the marine, chemolithoautotrophic, ammonia-oxidizing bacterium Nitrosococcus oceani ATCC 19707."
Klotz M.G., Arp D.J., Chain P.S.G., El-Sheikh A.F., Hauser L.J., Hommes N.G., Larimer F.W., Malfatti S.A., Norton J.M., Poret-Peterson A.T., Vergez L.M., Ward B.B.
Appl. Environ. Microbiol. 72:6299-6315(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19707 / NCIMB 11848.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000127 Genomic DNA. Translation: ABA59421.1.
RefSeqYP_344951.1. NC_007484.1.

3D structure databases

ProteinModelPortalQ3J6X5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING323261.Noc_2979.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA59421; ABA59421; Noc_2979.
GeneID3707458.
KEGGnoc:Noc_2979.
PATRIC22710512. VBINitOce57959_3454.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2202.
HOGENOMHOG000076217.
OMAGEITHFL.
OrthoDBEOG6FRCV5.

Enzyme and pathway databases

BioCycNOCE323261:GCI3-3031-MONOMER.

Family and domain databases

InterProIPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
IPR013767. PAS_fold.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF00989. PAS. 1 hit.
PF13426. PAS_9. 3 hits.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00086. PAC. 4 hits.
SM00091. PAS. 4 hits.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 4 hits.
SSF81606. SSF81606. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 4 hits.
PROSITEPS50113. PAC. 3 hits.
PS50112. PAS. 4 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3J6X5_NITOC
AccessionPrimary (citable) accession number: Q3J6X5
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)