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Q3J644 (Q3J644_RHOS4) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Probable phosphopentomutase protein EMBL ABA77740.1
EC=5.4.2.7 EMBL ABA77740.1
Gene names
Name:deoB EMBL ABA77740.1
Ordered Locus Names:RHOS4_01720
ORF Names:RSP_1596 EMBL ABA77740.1
OrganismRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [Reference proteome] [HAMAP] EMBL ABA77740.1
Taxonomic identifier272943 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter ›

Protein attributes

Sequence length398 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphotransfer between the C1 and C5 carbon atoms of pentose By similarity. SAAS SAAS010045

Catalytic activity

2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-alpha-D-ribose 5-phosphate. SAAS SAAS010045

Alpha-D-ribose 1-phosphate = D-ribose 5-phosphate. SAAS SAAS010045

Cofactor

Binds 1 or 2 manganese ions By similarity. SAAS SAAS010045

Pathway

Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route II): step 1/3. SAAS SAAS010045

Subcellular location

Cytoplasm By similarity SAAS SAAS010045.

Sequences

Sequence LengthMass (Da)Tools
Q3J644 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 46F08EF2A5B01FF9

FASTA39841,499
        10         20         30         40         50         60 
MPRAFLIVMD SVGCGGAPDA AAFGDAGSNT LGHIAEACAA GRAEEGRSGP LRLPVLDALG 

        70         80         90        100        110        120 
LGRAIELASG LTAPGLGAEP SGRWGAATEV SKGKDTPSGH WELAGVPVPW DWHYFPDRCP 

       130        140        150        160        170        180 
AFPDDLTAEI CRRAGTEGIL GNRHASGTAV IEELGAEHVR TGWPICYTSA DSVLQIAAHE 

       190        200        210        220        230        240 
EAFGLDRLLA LCAGLAPTLH AMRVGRVIAR PFTGAPGSFA RTPNRRDYAI APPAPTLLDI 

       250        260        270        280        290        300 
AAAAGRATHA IGKIGDIFSH RGIGQLHKGR DDAALFDRLD ALADTAEEGA LTFANFVEFD 

       310        320        330        340        350        360 
SLYGHRRDVS GYARALEWFD GRAGAFLARL RPGDMALFTA DHGNDPTFRG TEHTRERVPV 

       370        380        390 
LIAGTGEGPL GLCAYADVAA TVAAHLGLSN PGPGRALA

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References

[1]"Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000143 Genomic DNA. Translation: ABA77740.1.
RefSeqYP_351641.1. NC_007493.1.

3D structure databases

ProteinModelPortalQ3J644.
ModBaseSearch...

Protein-protein interaction databases

STRING272943.RSP_1596.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3718586.
KEGGrsp:RSP_1596.
PATRIC23150142. VBIRhoSph57909_0475.

Phylogenomic databases

eggNOGCOG1015.
HOGENOMHOG000008159.
KOK01839.
OMAPNMAKLG.
ProtClustDBPRK05362.

Enzyme and pathway databases

BioCycRSPH272943:GJAS-181-MONOMER.
UniPathwayUPA00087; UER00173.

Family and domain databases

Gene3D3.30.70.1250. 1 hit.
3.40.720.10. 2 hits.
InterProIPR017849. Alkaline_Pase-like_a/b/a.
IPR017850. Alkaline_phosphatase_core.
IPR010045. DeoB.
IPR006124. Metalloenzyme.
IPR024052. Phosphopentomutase_DeoB_cap.
[Graphical view]
PfamPF01676. Metalloenzyme. 1 hit.
[Graphical view]
PIRSFPIRSF001491. Ppentomutase. 1 hit.
SUPFAMSSF53649. Alkaline_phosphatase_core. 1 hit.
SSF143856. SSF143856. 1 hit.
TIGRFAMsTIGR01696. deoB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3J644_RHOS4
AccessionPrimary (citable) accession number: Q3J644
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info