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Q3J5J1

- Q3J5J1_RHOS4

UniProt

Q3J5J1 - Q3J5J1_RHOS4

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Protein
Superoxide dismutase [Cu-Zn]
Gene
sodC, RSP_1796
Organism
Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Binds 1 copper ion per subunit By similarity.UniRule annotation
Binds 1 zinc ion per subunit By similarity.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Keywords - Ligandi

    CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

    Enzyme and pathway databases

    BioCyciRSPH272943:GJAS-387-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodCImported
    ORF Names:RSP_1796Imported
    OrganismiRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)Imported
    Taxonomic identifieri272943 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
    ProteomesiUP000002703: Chromosome 1

    Interactioni

    Protein-protein interaction databases

    STRINGi272943.RSP_1796.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3J5J1.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2032.
    HOGENOMiHOG000263448.
    KOiK04565.
    OMAiRAENATA.
    OrthoDBiEOG6K13RS.
    PhylomeDBiQ3J5J1.

    Family and domain databases

    Gene3Di2.60.40.200. 1 hit.
    InterProiIPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view]
    PfamiPF00080. Sod_Cu. 1 hit.
    [Graphical view]
    SUPFAMiSSF49329. SSF49329. 1 hit.
    PROSITEiPS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3J5J1-1 [UniParc]FASTAAdd to Basket

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    MSRTIAIAAA ALLAAPALAQ DVPARAENAT AAPGQPGFPE RTATFMSVEG    50
    TPLGKATIAP LPHGVLFTLD LQGLPPESWL GFHIHETGEC DTGTGFKSAG 100
    GHFSIAETEH GLMVEAGPHS GDMPNQYVGA DGILRAQVFN TFVQLGGENA 150
    SDLTGRALML HSGPDDYVSQ PAGDAGDRLA CAVIE 185
    Length:185
    Mass (Da):19,016
    Last modified:November 8, 2005 - v1
    Checksum:iB1F4A212AE6FFF58
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000143 Genomic DNA. Translation: ABA77943.1.
    RefSeqiYP_351844.1. NC_007493.2.

    Genome annotation databases

    EnsemblBacteriaiABA77943; ABA77943; RSP_1796.
    GeneIDi3719041.
    KEGGirsp:RSP_1796.
    PATRICi23150551. VBIRhoSph57909_0676.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000143 Genomic DNA. Translation: ABA77943.1 .
    RefSeqi YP_351844.1. NC_007493.2.

    3D structure databases

    ProteinModelPortali Q3J5J1.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 272943.RSP_1796.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABA77943 ; ABA77943 ; RSP_1796 .
    GeneIDi 3719041.
    KEGGi rsp:RSP_1796.
    PATRICi 23150551. VBIRhoSph57909_0676.

    Phylogenomic databases

    eggNOGi COG2032.
    HOGENOMi HOG000263448.
    KOi K04565.
    OMAi RAENATA.
    OrthoDBi EOG6K13RS.
    PhylomeDBi Q3J5J1.

    Enzyme and pathway databases

    BioCyci RSPH272943:GJAS-387-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.200. 1 hit.
    InterProi IPR018152. SOD_Cu/Zn_BS.
    IPR001424. SOD_Cu_Zn_dom.
    [Graphical view ]
    Pfami PF00080. Sod_Cu. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49329. SSF49329. 1 hit.
    PROSITEi PS00332. SOD_CU_ZN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
      Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158.

    Entry informationi

    Entry nameiQ3J5J1_RHOS4
    AccessioniPrimary (citable) accession number: Q3J5J1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: July 9, 2014
    This is version 67 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    External Data

    Dasty 3

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