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Protein
Submitted name:

Monosaccharide ABC transporter substrate-binding protein, CUT2 family

Gene

RSP_2365

Organism
Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciRSPH272943:GJAS-983-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Monosaccharide ABC transporter substrate-binding protein, CUT2 familyImported
Gene namesi
ORF Names:RSP_2365Imported
OrganismiRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)Imported
Taxonomic identifieri272943 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter
Proteomesi
  • UP000002703 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence analysisAdd
BLAST
Chaini25 – 320296Sequence analysisPRO_5004226404Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi166 ↔ 224Combined sources

Interactioni

Protein-protein interaction databases

STRINGi272943.RSP_2365.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3L49X-ray2.30A/B/C/D29-309[»]
ProteinModelPortaliQ3J3W0.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ3J3W0.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 293260Peripla_BP_4InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4108KFQ. Bacteria.
COG1879. LUCA.
HOGENOMiHOG000219564.
KOiK10439.
OMAiSHYFDIK.
OrthoDBiEOG6WT8CN.
PhylomeDBiQ3J3W0.

Family and domain databases

InterProiIPR028082. Peripla_BP_I.
IPR025997. SBP_2_dom.
[Graphical view]
PfamiPF13407. Peripla_BP_4. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3J3W0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTKTAKGLT IALLLLATLS PALAEELTLE GKTIGITAIG TDHDWDLKAY
60 70 80 90 100
QAQIAEIERL GGTAIALDAG RNDQTQVSQI QTLIAQKPDA IIEQLGNLDV
110 120 130 140 150
LNPWLQKIND AGIPLFTVDT ATPHAINNTT SNNYSIGAEL ALQMVADLGG
160 170 180 190 200
KGNVLVFNGF YSVPVCKIRY DQMKYVLEAF PDVKIIEPEL RDVIPNTIQS
210 220 230 240 250
AYSNVTDMLT KYPNEGDVGA IWACWDVPMI GATQALQAAG RTDIRTYGVD
260 270 280 290 300
GSPEFVEMVA DPESPAGAVA AQQPSEIGKL AVQNVARHLA GQEVKPFTFA
310 320
PAVLITKENA AETAADFLPK
Length:320
Mass (Da):34,260
Last modified:November 8, 2005 - v1
Checksum:i79C25DFF73F6D0D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000143 Genomic DNA. Translation: ABA78524.1.
RefSeqiWP_011337433.1. NZ_AKVW01000001.1.
YP_352425.1. NC_007493.2.

Genome annotation databases

EnsemblBacteriaiABA78524; ABA78524; RSP_2365.
GeneIDi3719902.
KEGGirsp:RSP_2365.
PATRICi23151779. VBIRhoSph57909_1282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000143 Genomic DNA. Translation: ABA78524.1.
RefSeqiWP_011337433.1. NZ_AKVW01000001.1.
YP_352425.1. NC_007493.2.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3L49X-ray2.30A/B/C/D29-309[»]
ProteinModelPortaliQ3J3W0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272943.RSP_2365.

Protocols and materials databases

DNASUi3719902.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABA78524; ABA78524; RSP_2365.
GeneIDi3719902.
KEGGirsp:RSP_2365.
PATRICi23151779. VBIRhoSph57909_1282.

Phylogenomic databases

eggNOGiENOG4108KFQ. Bacteria.
COG1879. LUCA.
HOGENOMiHOG000219564.
KOiK10439.
OMAiSHYFDIK.
OrthoDBiEOG6WT8CN.
PhylomeDBiQ3J3W0.

Enzyme and pathway databases

BioCyciRSPH272943:GJAS-983-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ3J3W0.

Family and domain databases

InterProiIPR028082. Peripla_BP_I.
IPR025997. SBP_2_dom.
[Graphical view]
PfamiPF13407. Peripla_BP_4. 1 hit.
[Graphical view]
SUPFAMiSSF53822. SSF53822. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158Imported.
  2. "CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER FROM Rhodobacter sphaeroides."
    Patskovsky Y., Ozyurt S., Dickey M., Do J., Wasserman S.R., Sauder J.M., Burley S.K., Almo S.C.
    Submitted (DEC-2009) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 29-309, DISULFIDE BONDS.

Entry informationi

Entry nameiQ3J3W0_RHOS4
AccessioniPrimary (citable) accession number: Q3J3W0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: March 16, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.