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Q3J300 (Q3J300_RHOS4) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL ABA78834.1
Gene names
ORF Names:RSP_2679 EMBL ABA78834.1
OrganismRhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [Reference proteome] [HAMAP] EMBL ABA78834.1
Taxonomic identifier272943 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeRhodobacter

Protein attributes

Sequence length868 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q3J300 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 9DE50A85CC5E4817

FASTA86895,944
        10         20         30         40         50         60 
MPANPRQDLD RYRAKRDFAR TPEPQGRSEA PRPEAESLSF VVQKHAASRL HWDFRLEWNG 

        70         80         90        100        110        120 
VLLSWAVTRG PSPDPSARRL AVRTEDHPLD YAEFEGTIPK GEYGGGTVML WDRGTWEPQG 

       130        140        150        160        170        180 
DFAEGLRTGQ LKIRLAGERM RGRWTLVRMK PRPREKAENW LLIKEHDTHE SEQTEELVER 

       190        200        210        220        230        240 
HMTSVATGRT MEQIAAGKAP PRRTRQAALP AFRPLQLARL VSAAPEGEDW IHETKFDGYR 

       250        260        270        280        290        300 
CLAALAGGRA RLYTRSGLDW TAKFGALVED VEALEAQEAL IDGEVIAPGR EGGSFSELQA 

       310        320        330        340        350        360 
RLKSGGQLLF MTFDLLLLDG EDLTGQPLLA RKERLKTLIG KGRGAVRFSG HIRGHGPEVH 

       370        380        390        400        410        420 
ERICAAGLEG IVSKRASAPY AGSRNGDWLK VKCAHRQEFV ICGWNASDKP GRPFASLVMG 

       430        440        450        460        470        480 
SYEKSRLVYR GSVGSGFGAP LFRELKPLLA ERAQSACPFD RTPAEAKGAH WLKPELVAEV 

       490        500        510        520        530        540 
SFTELTAEGH IRHGVFAGLR SDKDAREVRL EEPAPETPAP RKSGVRKKGT KTARPDAPSP 

       550        560        570        580        590        600 
DEPAPEPARK PRTARGEKKE TTMARPDDLR VAGIRISHPD RRIYDRPAVT KREVAEHAEA 

       610        620        630        640        650        660 
LAPRMLRFLK DRPVSLLRCP EGAAAECFFQ KHRTRGMPVA MKTVPVETKS GPEDFITLPD 

       670        680        690        700        710        720 
VAALVGATQM GTLEFHIWGS RNRSLQRPDR LVFDLDPDEG LDFAHVRTAA AELRGLLTDL 

       730        740        750        760        770        780 
GLPSVPMLSG GKGVHVIVPL KPKAEWESVK LFSRALATHL AQEAPDRYTA TMAKAGRKGR 

       790        800        810        820        830        840 
IFIDWLRNDR GSTAIAPYSL RARPGAPVAT PVDWDELASA RSGGDWTIRS IRDRLDRPCP 

       850        860 
LAEASARPAT LGRTVIGRLE RLVAGGKP 

« Hide

References

[1]"Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000143 Genomic DNA. Translation: ABA78834.1.
RefSeqYP_352735.1. NC_007493.2.

3D structure databases

ProteinModelPortalQ3J300.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272943.RSP_2679.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABA78834; ABA78834; RSP_2679.
GeneID3720370.
KEGGrsp:RSP_2679.
PATRIC23152423. VBIRhoSph57909_1602.

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAWLKVKCT.
OrthoDBEOG661H49.
ProtClustDBCLSK886471.

Enzyme and pathway databases

BioCycRSPH272943:GJAS-1297-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3J300_RHOS4
AccessionPrimary (citable) accession number: Q3J300
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: April 16, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)