Q3IZH7 (Q3IZH7_RHOS4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Formylmethionine deformylase EMBL ABA80057.1

Gene names

Ordered Locus Names:	RHOS4_24890
ORF Names:	RSP_0874 EMBL ABA80057.1

Organism

Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) EMBL ABA80057.1

Taxonomic identifier

272943 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter

Protein attributes

Sequence length	167 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity

Formyl-L-methionyl peptide + H2O = formate + methionyl peptide. SAAS SAAS000181

Ontologies

Keywords
Biological process	Protein biosynthesis SAAS SAAS000181
Ligand	Metal-binding SAAS SAAS000181
Molecular function	Hydrolase SAAS SAAS000181
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	iron ion binding Inferred from electronic annotation. Source: InterPro peptide deformylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3IZH7 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 1AFDBE7003A13F07	FASTA	167	18,795
	10 20 30 40 50 60 MIRPFVMYPD KRLKTVATPV EAVTDEIRAI WTDMIETMDA MPGYGLAAPQ IGVMLRLAVV 70 80 90 100 110 120 DCSENRGKAI RLANPEILHA SGQFREHEEG SPNLPGASAV ISRPRAVTVR FLNEAGEIEE 130 140 150 160 RDFVDIWATS VQHQIDHLNG RLYIDRLSPL KRKMVVAKSE KYLRRVG

References

[1]

"Complete sequence of chromosome 1 of Rhodobacter sphaeroides 2.4.1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000143 Genomic DNA. Translation: ABA80057.1.
RefSeq	YP_353958.1. NC_007493.1.
3D structure databases
ProteinModelPortal	Q3IZH7.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3IZH7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3718228.
GenomeReviews	Gene locus RHOS4_24890 in contig CP000143_GR.
KEGG	rsp:RSP_0874.
NMPDR	fig|272943.3.peg.2638.
PATRIC	23154943. VBIRhoSph57909_2840.
Phylogenomic databases
eggNOG	COG0242.
HOGENOM	HBG665227.
OMA	QHQIDHL.
PhylomeDB	Q3IZH7.
ProtClustDB	CLSK934097.
Enzyme and pathway databases
BioCyc	RSPH272943:RSP_0874-MONOMER.
Family and domain databases
HAMAP	MF_00163. Pep_deformylase. [Tree]
InterPro	IPR000181. Fmet_deformylase. IPR023635. Peptide_deformylase. [Graphical view]
Gene3D	G3DSA:3.90.45.10. Fmet_deformylase. 1 hit.
KO	K01462.
PANTHER	PTHR10458. Fmet_deformylase. 1 hit.
Pfam	PF01327. Pep_deformylase. 1 hit. [Graphical view]
PIRSF	PIRSF004749. Pep_def. 1 hit.
PRINTS	PR01576. PDEFORMYLASE.
SUPFAM	SSF56420. Fmet_deformylase. 1 hit.
TIGRFAMs	TIGR00079. Pept_deformyl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3IZH7_RHOS4

Accession

Primary (citable) accession number: Q3IZH7

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	January 25, 2012
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)