Reviewed,
UniProtKB/Swiss-Prot Q3IXK6 (DADA_RHOS4)
Last modified
November 25, 2008.
Version 29.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: D-amino acid dehydrogenase small subunit EC=1.4.99.1 | ||||||
| Gene names |
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| Organism | Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) [Complete proteome] [HAMAP] | ||||||
| Taxonomic identifier | 272943 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Rhodobacter |
Protein attributes
| Sequence length | 436 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Oxidative deamination of D-amino acids By similarity. |
| Catalytic activity | A D-amino acid + H(2)O + acceptor = a 2-oxo acid + NH(3) + reduced acceptor. |
| Cofactor | FAD By similarity. |
| Pathway | Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. |
| Subunit structure | Heterodimer of a small and a large subunit By similarity. |
| Sequence similarities | Belongs to the dadA oxidoreductase family. |
Ontologies
Keywords | |
|---|---|
| Ligand | FAD Flavoprotein |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Biological process | alanine catabolic process Inferred from electronic annotation. Source: HAMAP oxidation reductionInferred from electronic annotation. Source: UniProtKB-KW potassium ion transportInferred from electronic annotation. Source: InterPro |
| Molecular function | D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP cation transmembrane transporter activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| [1] | "Complete sequence of chromosome 2 of Rhodobacter sphaeroides 2.4.1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Richardson P., Mackenzie C., Choudhary M., Larimer F., Hauser L.J., Land M., Donohue T.J., Kaplan S. Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| CP000144 Genomic DNA. Translation: ABA80728.1. | |
| RefSeq | YP_354629.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 3721388. |
| GenomeReviews | Gene locus RHOS4_31600 in contig CP000144_GR. |
| KEGG | rsp:RSP_3113. |
| NMPDR | fig|272943.3.peg.3123. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | Q3IXK6. |
Enzyme and pathway databases | |
| BioCyc | RSPH272943:RSP_3113-MON. |
Family and domain databases | |
| HAMAP | MF_01202. [Tree] |
| InterPro | IPR006076. FAD-dep_OxRdtase. IPR006036. K_uptake_TrkA. [Graphical view] |
| Pfam | PF01266. DAO. 1 hit. [Graphical view] |
| PRINTS | PR00335. KUPTAKETRKA. |
| ProtoNet | Search... |
Entry information
| Entry name | DADA_RHOS4 | ||||||||
| Accession | Primary (citable) accession number: Q3IXK6 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


