Q3ILH5 (Q3ILH5_PSEHT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alginate lyase EMBL CAI85658.1
EC=4.2.2.3 EMBL CAI85658.1

Gene names

Ordered Locus Names:

PSHAa0571

Organism

Pseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]

Taxonomic identifier

326442 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas › Pseudoalteromonas haloplanktis

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAI85658.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	poly(beta-D-mannuronate) lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3ILH5 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: B0F08AB29B7DAF9D	FASTA	367	40,602
	10 20 30 40 50 60 MNKNNITHLI KPGALIALTT SLVIGCVSQQ PKSTEQQANP LVPASKFDLS HWKINVPVDL 70 80 90 100 110 120 DNDGKIDEID VKKIQTYSHP DFFYLDDKGY MVFTSPNKAL TSANSTNTRS EFRQMLRGAN 130 140 150 160 170 180 TKIKTKSPKN NFALAVHPLS DRFGSIGGKM EATLKVDHVA LRATDPSKNA AYSVVVGQIH 190 200 210 220 230 240 AGKDQALIDT KLGYGWGNEP LKIYYKKWPG HKTGSVFWNY ERNLPKTDPN RTDIAYPVWG 250 260 270 280 290 300 NTWENPNEPG NAGIALGEEF SYTVNVYKNV MHLTFSTAGK NDVSYSINLG NNVDAYGNVD 310 320 330 340 350 360 EKDHPHGYAA DWHYFKAGAY NQCSTKNAKG IWYPGCLGTG DWATDKQNGD YAQVSFSKLV LSPASPQ

References

[1]

"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125." Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P., Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G., Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z. , Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A. Genome Res. 15:1325-1335(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TAC 125.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR954246 Genomic DNA. Translation: CAI85658.1.
RefSeq	YP_339101.1. NC_007481.1.
3D structure databases
ProteinModelPortal	Q3ILH5.
ModBase	Search...
Protein-protein interaction databases
STRING	326442.PSHAa0571.
Protein family/group databases
CAZy	PL7. Polysaccharide Lyase Family 7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAI85658; CAI85658; PSHAa0571.
GeneID	3708671.
KEGG	pha:PSHAa0571.
PATRIC	32294677. VBIPseHal105694_0539.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG139342.
HOGENOM	HOG000121813.
KO	K01729.
OMA	SVFWNYE.
ProtClustDB	CLSK769485.
Enzyme and pathway databases
BioCyc	PHAL326442:GJIU-583-MONOMER.
Family and domain databases
Gene3D	2.60.120.200. 1 hit.
InterPro	IPR014895. Alginate_lyase_2. IPR008985. ConA-like_lec_gl_sf. IPR013320. ConA-like_subgrp. IPR018247. EF_Hand_1_Ca_BS. [Graphical view]
Pfam	PF08787. Alginate_lyase2. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
PROSITE	PS00018. EF_HAND_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3ILH5_PSEHT

Accession

Primary (citable) accession number: Q3ILH5

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)