Q3IJ34 (Q3IJ34_PSEHT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative dihydrodipicolinate synthase EMBL CAI85283.1
EC=4.2.1.52 EMBL CAI85283.1

Gene names

Name:	dapA EMBL CAI85283.1
Ordered Locus Names:	PSHAa0180

Organism

Pseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]

Taxonomic identifier

326442 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	294 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O. SAAS SAAS005263
Pathway	Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; (S)-tetrahydrodipicolinate from L-aspartate: step 3/4. SAAS SAAS005263
Subcellular location	Cytoplasm By similarity SAAS SAAS005263.

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Diaminopimelate biosynthesis SAAS SAAS005263 Lysine biosynthesis SAAS SAAS005263
Cellular component	Cytoplasm SAAS SAAS005263
Ligand	Schiff base SAAS SAAS005263
Molecular function	Lyase SAAS SAAS005263 EMBL CAI85283.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	diaminopimelate biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	dihydrodipicolinate synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3IJ34 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 57F9FF4D6FD0F04F	FASTA	294	32,261
	10 20 30 40 50 60 MIKNFNLDDY SVWTALVTPF NQNGTIDYGT LTTLVAEQAA ANNAILLLGS TGEGLALTLK 70 80 90 100 110 120 EQQAIVEHVC QLSPNVPLMV AVGGMNLKQQ LAWVEYCNHL PIHSFLLGSP LYAKPGVIGQ 130 140 150 160 170 180 THWFESLLNI SKHPCMLYNV PGRSAVDIPV ATIQNLQQHK NLWALKEASG NIAQFEAYRQ 190 200 210 220 230 240 AAPNLAIFSG DDALMPYFAQ AGAKGLVSVA ANAWPLQTHE FVQRSLSGQY PNLFTQWSSA 250 260 270 280 290 ISSLFTVANP IPVKVLMHLQ GRLTSSYLRP PLTHLELTQT TCIEQANNTI LSWH

References

[1]

"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125." Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C. , Rouy Z., Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A. Genome Res. 15:1325-1335(2005) [PubMed: 16169927] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR954246 Genomic DNA. Translation: CAI85283.1.
RefSeq	YP_338726.1. NC_007481.1.
3D structure databases
ProteinModelPortal	Q3IJ34.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3IJ34.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3708188.
GenomeReviews	Gene locus PSHAa0180 in contig CR954246_GR.
KEGG	pha:PSHAa0180.
NMPDR	fig|326442.4.peg.264.
PATRIC	32293895. VBIPseHal105694_0173.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0329.
HOGENOM	HBG358848.
OMA	GRAIELP.
ProtClustDB	PRK03170.
Enzyme and pathway databases
BioCyc	PHAL326442:PSHAA0180-MONOMER.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002220. Dihydrodipicolinate_synth-like. IPR020625. Dihydrodipicolinate_synth_AS. IPR020624. Dihydrodipicolinate_synth_CS. IPR005263. Dihydrodipicolinate_synth_DapA. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01714.
PANTHER	PTHR12128. DHDPS. 1 hit.
Pfam	PF00701. DHDPS. 1 hit. [Graphical view]
PIRSF	PIRSF001365. DHDPS. 1 hit.
PRINTS	PR00146. DHPICSNTHASE.
TIGRFAMs	TIGR00674. DapA. 1 hit.
PROSITE	PS00665. DHDPS_1. 1 hit. PS00666. DHDPS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3IJ34_PSEHT

Accession

Primary (citable) accession number: Q3IJ34

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	December 14, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)