Q3IIZ7 (GLND_PSEHT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
[Protein-PII] uridylyltransferase
Short name=PII uridylyl-transferase
EC=2.7.7.59

Alternative name(s):
UTase
Uridylyl-removing enzyme

Gene names

Name:	glnD
Ordered Locus Names:	PSHAa2038

Organism

Pseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]

Taxonomic identifier

326442 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas › Pseudoalteromonas haloplanktis

Protein attributes

Sequence length	872 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Modifies, by uridylylation or deuridylylation the PII (GlnB) regulatory protein By similarity. HAMAP-Rule MF_00277
Catalytic activity	UTP + [protein-PII] = diphosphate + uridylyl-[protein-PII]. HAMAP-Rule MF_00277
Sequence similarities	Belongs to the GlnD family.

Ontologies

Keywords
Molecular function	Nucleotidyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nitrogen fixation Inferred from electronic annotation. Source: HAMAP
Molecular_function	[protein-PII] uridylyltransferase activity Inferred from electronic annotation. Source: HAMAP metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 872	872	[Protein-PII] uridylyltransferase HAMAP-Rule MF_00277		PRO_0000231685

Sequences

	Sequence		Length	Mass (Da)
	Q3IIZ7 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 473147E4F7F35DA0	FASTA	872	101,049
	10 20 30 40 50 60 MALPNKVKKL LSDAEQLSDY RDCSSYFYKW LFNEFSKQPV GNLINARAEF IDRLLIKLFH 70 80 90 100 110 120 VYDLAHEPDL ALIAVGGYGR GELHPYSDID FLLLVTQQPN AEISEKIGQF VTMLWDLNLE 130 140 150 160 170 180 IGHSVRTIAQ AIEQKREDVT FATSLLESRL IFGNHIEFEK LKNHIIDTPV WRSNEFFLAK 190 200 210 220 230 240 VQEQHLRHRK CHGTAYNLEP NIKENPGGLR DLQTIIWVAK KHFRAETLQE LISHGYLTHE 250 260 270 280 290 300 EFQELSECLE NLWNIRFALH LAAGRSENRL LFDHQPQAAE ILGFGSDGKS SVERMMKRLF 310 320 330 340 350 360 RIMSRVRELN LMLLAYFEQS ISPKHHQPII QELDRNFERI GNQIKVKSPS VFFRRDQLFM 370 380 390 400 410 420 LFEHIADNPE ITHIYPSTIR TIRQVRRRLL GDLQDYAACR EAFLRLIKHP NGMGRAFTLM 430 440 450 460 470 480 HKHGMLAAYL PQWRNIFGQM QFDLFHAYTV DEHTHRLINN IYQYFDKTGV SEFPICSEIV 490 500 510 520 530 540 TRMDKPELLY LAGIFHDIAK GRGGDHSELG AVDALAFAKL HAFSVADGKL IAWLVSNHLL 550 560 570 580 590 600 MSVTAQRKDI NDPGVIKDFA TRVKTERQLD YLYCLTVADI RATNDNLWND WKNTLLRELY 610 620 630 640 650 660 LHTQHALRLG LENPMDQRDQ IRDKKHQAKQ RLLNLGYMED QIDLIWSRFK ANYFTAFSEQ 670 680 690 700 710 720 QISWHSQHLV NSEDLSQPSV IVSNKAMHGG TQVFVYSPYS GPLFARLVSV IGSKKAQIQH 730 740 750 760 770 780 AQVLTTKDGY VLFNFVILEV NGEPIASGRA QSIKRALEQA LFEPRKKIRF KKNRSQRFKD 790 800 810 820 830 840 FNIKPKIVLR PHPRKDRSLI EIQAIDIPGL LTKIAEVFQA HLLHIHAARI TTVGQRAEDF 850 860 870 FVVSNNEYQA LTDEEQAKIH QALRKKLNAE TE

References

[1]

"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125." Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C. , Rouy Z., Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A. Genome Res. 15:1325-1335(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TAC 125.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR954246 Genomic DNA. Translation: CAI87094.1.
RefSeq	YP_340537.1. NC_007481.1.
3D structure databases
ProteinModelPortal	Q3IIZ7.
ModBase	Search...
Protein-protein interaction databases
STRING	326442.PSHAa2038.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAI87094; CAI87094; PSHAa2038.
GeneID	3708244.
KEGG	pha:PSHAa2038.
PATRIC	32297675. VBIPseHal105694_1966.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2844.
HOGENOM	HOG000261778.
KO	K00990.
OMA	SPKVWNA.
Enzyme and pathway databases
BioCyc	PHAL326442:GJIU-2090-MONOMER.
Family and domain databases
Gene3D	1.10.3210.10. 1 hit.
HAMAP	MF_00277. PII_uridylyl-transf.
InterPro	IPR010043. GlnD_Uridyltrans. IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR002934. Nucleotidyltransferase. IPR013546. PII_UdlTrfase/GS_AdlTrfase. [Graphical view]
PANTHER	PTHR13734:SF1. PTHR13734:SF1. 1 hit.
Pfam	PF08335. GlnD_UR_UTase. 1 hit. PF01966. HD. 1 hit. PF01909. NTP_transf_2. 1 hit. [Graphical view]
PIRSF	PIRSF006288. PII_uridyltransf. 1 hit.
SMART	SM00471. HDc. 1 hit. [Graphical view]
TIGRFAMs	TIGR01693. UTase_glnD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLND_PSEHT

Accession

Primary (citable) accession number: Q3IIZ7

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program