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Q3IHV8 (Q3IHV8_PSEHT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PSHAa2293 EMBL CAI87349.1
OrganismPseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP] EMBL CAI87349.1
Taxonomic identifier326442 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

Protein attributes

Sequence length541 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q3IHV8 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 661902D15931843B

FASTA54159,870
        10         20         30         40         50         60 
MDQKRFAVAS KESLKRIFTV PEAPDSTLSK IELEISSNLA GFLNENIAAI EKPLHEIEKD 

        70         80         90        100        110        120 
FQSAMIPEDP TFVSAYAQDI MEQLVAHSVH TAAPSFIGHM TSALPHFLLP LSKLMVGLNQ 

       130        140        150        160        170        180 
NLVKIETSKA FTPLERQVLG MMHHLAYGQQ DEFYAKWMHS AKTSLGAFCS GGTVANITAL 

       190        200        210        220        230        240 
WIARNRLLKP DGDFRGIGAQ GLIAGMLHYG YKGLAILISE RGHYSLGKAA DLLGIGRENL 

       250        260        270        280        290        300 
VGIKTCENNK VDVNAMREKA LELEAQGIKV MAIIGVAGTT ETGNIDPLEA MADLAQDINC 

       310        320        330        340        350        360 
HFHVDAAWGG ATLLSNTHRH LLKGVERADS ITIDAHKQMY VPMGAGLVLF KDPTATDAIE 

       370        380        390        400        410        420 
HHAEYILRKG SKDLGSHTLE GSRPGMAMLV HACLRVIGRK GYEMLIDRSI KKTHYFANLI 

       430        440        450        460        470        480 
KADEDFELIS EPELCLLTYR YVPKQIKQAI ADADPQTRID IFASLNRFTA SMQKRQRESG 

       490        500        510        520        530        540 
RSFVSRTRLT PTQYDNQPTV VFRVVLANPL TSGVILKEIL AEQKELAKTD PVFKKYLSKY 


M 

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References

[1]"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125."
Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C. expand/collapse author list , Rouy Z., Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.
Genome Res. 15:1325-1335(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TAC 125.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR954246 Genomic DNA. Translation: CAI87349.1.
RefSeqYP_340791.1. NC_007481.1.

3D structure databases

ProteinModelPortalQ3IHV8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING326442.PSHAa2293.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAI87349; CAI87349; PSHAa2293.
GeneID3708433.
KEGGpha:PSHAa2293.
PATRIC32298179. VBIPseHal105694_2213.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0076.
HOGENOMHOG000282553.
KOK01580.
OMAARYFRQP.
OrthoDBEOG6MSRZP.

Enzyme and pathway databases

BioCycPHAL326442:GJIU-2350-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3IHV8_PSEHT
AccessionPrimary (citable) accession number: Q3IHV8
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)