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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Pseudoalteromonas haloplanktis (strain TAC 125)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:PSHAa0656
OrganismiPseudoalteromonas haloplanktis (strain TAC 125)
Taxonomic identifieri326442 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas
Proteomesi
  • UP000006843 Componenti: Chromosome I

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002420681 – 580Arginine--tRNA ligaseAdd BLAST580

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi326442.PSHAa0656.

Structurei

3D structure databases

ProteinModelPortaliQ3IHI4.
SMRiQ3IHI4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi123 – 133"HIGH" regionAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C75. Bacteria.
COG0018. LUCA.
HOGENOMiHOG000247212.
KOiK01887.
OMAiNKPLHLG.
OrthoDBiPOG091H01RF.

Family and domain databases

CDDicd00671. ArgRS_core. 1 hit.
Gene3Di3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth. 1 hit.
InterProiView protein in InterPro
IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR036695. Arg-tRNA-synth_N_sf.
IPR035684. ArgRS_core.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiView protein in Pfam
PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
PRINTSiPR01038. TRNASYNTHARG.
SMARTiView protein in SMART
SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiView protein in PROSITE
PS00178. AA_TRNA_LIGASE_I. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3IHI4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIRTILVEK AIAAMTTVGL PADTNPAVTQ STRPQFGDYQ INAAMGAAKK
60 70 80 90 100
MKSNPRELAQ KIIDNLDVSD IAEKTEIAGP GFINIHLKPE FLAQSVKAAN
110 120 130 140 150
SDAKLAVNEH ANPQKVVVDY SSPNLAKEMH VGHLRSTIIG DAIVRALEFR
160 170 180 190 200
GDSVVRQNHM GDWGTQFGML IAHLEDQISQ GVDLDTVALA DLETFYRDAK
210 220 230 240 250
KRFDDEEGFA DKARNYVVKL QGGDAHCEKL WKLFIATSVK HSEEVYKRLN
260 270 280 290 300
VTLTQADIMA ESAYNAELND IISLLKDKNI AVESQGAQVV FLDELANKDG
310 320 330 340 350
EPSAFIVQKS GGGFLYATTD LAACDYRSNK LGADRILIFV DARQSLHFNQ
360 370 380 390 400
VELTARKAGF LRDETSYEFC PFGTMMGADN KPFKTRTGGT VKLADLLEES
410 420 430 440 450
INRAAIKLAE RESDLSEQER SEIARKVGIG AVKYADLSKH RTSDYIFNWD
460 470 480 490 500
SMLSFEGATA PYLQYAYTRI RSIFRKSGVD AATLNSNVTI VEPQEKALAL
510 520 530 540 550
KLLQLEEVLD LMITEATPHV LCGYLYELAS LYMTFYEACP VLKEGVEPNV
560 570 580
RDSRLVLCNL VSKTLETGLD LLGIEVMEQM
Length:580
Mass (Da):64,218
Last modified:November 8, 2005 - v1
Checksum:iA231842294783038
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR954246 Genomic DNA. Translation: CAI85741.1.
RefSeqiWP_011327354.1. NC_007481.1.

Genome annotation databases

EnsemblBacteriaiCAI85741; CAI85741; PSHAa0656.
KEGGipha:PSHAa0656.
PATRICifig|326442.8.peg.620.

Similar proteinsi

Entry informationi

Entry nameiSYR_PSEHT
AccessioniPrimary (citable) accession number: Q3IHI4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: November 8, 2005
Last modified: November 22, 2017
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families