Q3IGP5 (Q3IGP5_PSEHT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
NAD-linked malate dehydrogenase EMBL CAI86638.1
EC=1.1.1.40 EMBL CAI86638.1

Gene names

Name:	sfcA EMBL CAI86638.1
Ordered Locus Names:	PSHAa1565

Organism

Pseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]

Taxonomic identifier

326442 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas

Protein attributes

Sequence length	564 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the malic enzymes family. RuleBase RU003427

Ontologies

Keywords
Ligand	Metal-binding RuleBase RU003427
Molecular function	Oxidoreductase RuleBase RU003427 EMBL CAI86638.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	malate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	NAD binding Inferred from electronic annotation. Source: InterPro malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity Inferred from electronic annotation. Source: EC malate dehydrogenase (oxaloacetate-decarboxylating) activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3IGP5 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 145E426FEE48874F	FASTA	564	62,630
	10 20 30 40 50 60 MTTNTDPNYL YIHHSGPGLL ETPLLNKGSA FSQKERENFN IAGLLPPRYE TIEEQVERCY 70 80 90 100 110 120 QQYSSFTDNL NKHIYLRAIQ DNNETLYYRL VRDHIEEMMP IIYTPTVGDA CEKFSDIYRS 130 140 150 160 170 180 ARGLFISYEN RFQIDDILRN ATKGKVKVIV VTDGERILGL GDQGIGGMGI PIGKLSLYTA 190 200 210 220 230 240 CGGISPAYTL PVMLDVGTNN EKLLNDPMYM GARHKRITQD EYDEFLDLFI KAIKRRWPNV 250 260 270 280 290 300 LLQFEDFAQP NAMPLLKRYR NEICSFNDDI QGTAAVTVGS LLAACRVKNE RLADQKVVFV 310 320 330 340 350 360 GAGSAGCGIA EQIVSQMVFE GISEAQARSQ VFMVDRFGLL SEGMEGLRDF QQVLAQPQAR 370 380 390 400 410 420 LSEWTYSGEF ASLLDVMHCS KPDILIGVSG QPGLFTEQVI RAMYSGCAQP IIFPLSNPSK 430 440 450 460 470 480 QVEAHPIDII NWTEGKALVA TGSPFAPVEY NGELFPIPQC NNSYIFPGIG LGVIAAKATR 490 500 510 520 530 540 ITDAMLSVSS EMLAESSPRA NTGKGSLLPA LTEIETLSKR IAFAVGKKAI EEGVALDISD 550 560 DALWAAIDKN YWLPKYRNYK RSSI

References

[1]

"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125." Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C. , Rouy Z., Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A. Genome Res. 15:1325-1335(2005) [PubMed: 16169927] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR954246 Genomic DNA. Translation: CAI86638.1.
RefSeq	YP_340081.1. NC_007481.1.
3D structure databases
ProteinModelPortal	Q3IGP5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q3IGP5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3710730.
GenomeReviews	Gene locus PSHAa1565 in contig CR954246_GR.
KEGG	pha:PSHAa1565.
NMPDR	fig|326442.4.peg.2120.
PATRIC	32296703. VBIPseHal105694_1516.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0281.
HOGENOM	HBG289821.
OMA	QDNNETL.
PhylomeDB	Q3IGP5.
ProtClustDB	PRK13529.
Enzyme and pathway databases
BioCyc	PHAL326442:PSHAA1565-MONOMER.
Family and domain databases
InterPro	IPR015884. Malic_enzyme_CS. IPR012301. Malic_N. IPR012302. Malic_NAD-bd. IPR001891. Malic_OxRdtase. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.10380. G3DSA:3.40.50.10380. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00027.
Pfam	PF00390. malic. 1 hit. PF03949. Malic_M. 1 hit. [Graphical view]
PIRSF	PIRSF000106. ME. 1 hit.
PRINTS	PR00072. MALOXRDTASE.
SMART	SM00919. Malic_M. 1 hit. [Graphical view]
PROSITE	PS00331. MALIC_ENZYMES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q3IGP5_PSEHT

Accession

Primary (citable) accession number: Q3IGP5

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	December 14, 2011
This is version 54 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)