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Q3IFP4 (YJEA_PSEHT) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized protein YjeA
Gene names
Name:yjeA
Ordered Locus Names:PSHAa0475
OrganismPseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]
Taxonomic identifier326442 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

Protein attributes

Sequence length324 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processlysyl-tRNA aminoacylation

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functionATP binding

Inferred from electronic annotation. Source: InterPro

lysine-tRNA ligase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 324324Uncharacterized protein YjeA HAMAP MF_00174
PRO_1000023628

Sequences

Sequence LengthMass (Da)Tools
Q3IFP4 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 629881F0BC860BAF

FASTA32436,295
        10         20         30         40         50         60 
MSVNLWAPSA SIATLKQRAV ILRSIREFFY ARNVMEVETP SLSGASVTDI HLVSFNTRFV 

        70         80         90        100        110        120 
GPGHASGLEL YLQTSPEFAM KRLLAAGSGP IFQLCKAFRN EEAGSHHNPE FTMLEWYRPG 

       130        140        150        160        170        180 
FDEFALMAEI DELMQLILDV APSERLTYQH AFEQVLGLDP LTASLEQLQQ LACEQGFADI 

       190        200        210        220        230        240 
AKNETHRDTL LQLLFCMKVE PTIGQHKPCF VYHFPASQAA LAQICDHDSR VAGRFELYYK 

       250        260        270        280        290        300 
NMELANGFNE LTNATEQAKR FNDDNEYRKQ NGLKQVPMDK HLIAALEHGL APCAGVALGI 

       310        320 
DRLVMLATQK SNIKEVIAFD VTRA 

« Hide

References

[1]"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125."
Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C. expand/collapse author list , Rouy Z., Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.
Genome Res. 15:1325-1335(2005) [PubMed: 16169927] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: TAC 125.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR954246 Genomic DNA. Translation: CAI85572.1.
RefSeqYP_339015.1. NC_007481.1.

3D structure databases

ProteinModelPortalQ3IFP4.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3IFP4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3708719.
GenomeReviewsGene locus PSHAa0475 in contig CR954246_GR.
KEGGpha:PSHAa0475.
NMPDRfig|326442.4.peg.458.
PATRIC32294471. VBIPseHal105694_0452.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2269.
HOGENOMHBG631383.
OMAMPEASGI.
PhylomeDBQ3IFP4.

Enzyme and pathway databases

BioCycPHAL326442:PSHAA0475-MONOMER.

Family and domain databases

HAMAPMF_00174. YjeA.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004525. Lys-tRNA-synth-rel.
IPR018149. Lys-tRNA-synth_II_C.
[Graphical view]
KOK04568.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF7. PTHR22594:SF7. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
[Graphical view]
PRINTSPR00982. TRNASYNTHLYS.
TIGRFAMsTIGR00462. GenX. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameYJEA_PSEHT
AccessionPrimary (citable) accession number: Q3IFP4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: November 8, 2005
Last modified: January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families