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Protein
Submitted name:

Putative DNA ligase, ATP-dependent

Gene

PSHAa2177

Organism
Pseudoalteromonas haloplanktis (strain TAC 125)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPHAL326442:GJIU-2234-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase, ATP-dependentImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:PSHAa2177Imported
OrganismiPseudoalteromonas haloplanktis (strain TAC 125)Imported
Taxonomic identifieri326442 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas
ProteomesiUP000006843 Componenti: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi326442.PSHAa2177.

Structurei

3D structure databases

ProteinModelPortaliQ3IES5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q3IES5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFYIKLITLI TAVLFSSIVN ATLPKVLLAK VYDETKHSDV SNYLVSEKFD
60 70 80 90 100
GVRAIWTGKQ FVTRQGNVIN APEWFTAPLP KVWLDGELWT KHQHFAVLSG
110 120 130 140 150
IVRTKTPNNH DWQSITYQVF DMPDANVPFS QRYSNYSHLV AGLNSPHIKA
160 170 180 190 200
IKQHQFTNNQ LLTNYFKNIT AQGGEGVMLH LASAKHADGR SDALLKLKPY
210 220 230 240 250
LDAEAIVIAY LPGKGKYQGM LGALRVKTAQ GQLFSIGTGF SDAERESPPA
260 270 280
LGSTITYRFH GLTKNGLPRF ASFLRVRESL
Length:280
Mass (Da):31,282
Last modified:November 8, 2005 - v1
Checksum:i0CEFFAAA672C85A2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR954246 Genomic DNA. Translation: CAI87233.1.
RefSeqiWP_011328834.1. NC_007481.1.

Genome annotation databases

EnsemblBacteriaiCAI87233; CAI87233; PSHAa2177.
GeneIDi3709032.
KEGGipha:PSHAa2177.
PATRICi32297943. VBIPseHal105694_2095.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR954246 Genomic DNA. Translation: CAI87233.1.
RefSeqiWP_011328834.1. NC_007481.1.

3D structure databases

ProteinModelPortaliQ3IES5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi326442.PSHAa2177.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAI87233; CAI87233; PSHAa2177.
GeneIDi3709032.
KEGGipha:PSHAa2177.
PATRICi32297943. VBIPseHal105694_2095.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Enzyme and pathway databases

BioCyciPHAL326442:GJIU-2234-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TAC 125Imported.

Entry informationi

Entry nameiQ3IES5_PSEHT
AccessioniPrimary (citable) accession number: Q3IES5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: July 22, 2015
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.