Q3IES5 (Q3IES5_PSEHT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase, ATP-dependent EMBL CAI87233.1
EC=6.5.1.1 EMBL CAI87233.1

Gene names

Ordered Locus Names:

PSHAa2177

Organism

Pseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]

Taxonomic identifier

326442 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Pseudoalteromonadaceae › Pseudoalteromonas › Pseudoalteromonas haloplanktis

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CAI87233.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q3IES5 [UniParc]. Last modified November 8, 2005. Version 1. Checksum: 0CEFFAAA672C85A2	FASTA	280	31,282
	10 20 30 40 50 60 MFYIKLITLI TAVLFSSIVN ATLPKVLLAK VYDETKHSDV SNYLVSEKFD GVRAIWTGKQ 70 80 90 100 110 120 FVTRQGNVIN APEWFTAPLP KVWLDGELWT KHQHFAVLSG IVRTKTPNNH DWQSITYQVF 130 140 150 160 170 180 DMPDANVPFS QRYSNYSHLV AGLNSPHIKA IKQHQFTNNQ LLTNYFKNIT AQGGEGVMLH 190 200 210 220 230 240 LASAKHADGR SDALLKLKPY LDAEAIVIAY LPGKGKYQGM LGALRVKTAQ GQLFSIGTGF 250 260 270 280 SDAERESPPA LGSTITYRFH GLTKNGLPRF ASFLRVRESL

References

[1]

"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125." Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P., Cheung F., Cruveiller S., Damico S., Duilio A., Fang G., Feller G., Mangenot S., Marino G., Nilsson J., Parilli E., Rocha E., Rouy Z. , Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A. Genome Res. 15:1325-1335(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: TAC 125.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR954246 Genomic DNA. Translation: CAI87233.1.
RefSeq	YP_340675.1. NC_007481.1.
3D structure databases
ProteinModelPortal	Q3IES5.
ModBase	Search...
Protein-protein interaction databases
STRING	326442.PSHAa2177.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAI87233; CAI87233; PSHAa2177.
GeneID	3709032.
KEGG	pha:PSHAa2177.
PATRIC	32297943. VBIPseHal105694_2095.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
ProtClustDB	PRK09125.
Enzyme and pathway databases
BioCyc	PHAL326442:GJIU-2234-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q3IES5_PSEHT

Accession

Primary (citable) accession number: Q3IES5

Entry history

Integrated into UniProtKB/TrEMBL:	November 8, 2005
Last sequence update:	November 8, 2005
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)