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Q3IE28 (Q3IE28_PSEHT) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PSHAa0832
OrganismPseudoalteromonas haloplanktis (strain TAC 125) [Complete proteome] [HAMAP]
Taxonomic identifier326442 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesPseudoalteromonadaceaePseudoalteromonas

Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q3IE28 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 658A27A798C43355

FASTA40746,404
        10         20         30         40         50         60 
MYFYAARQPI LDRDKKLIGY ELLFRDGVNN VFPDIDGDEA TTRLIEGSQF NFGLEDLTDN 

        70         80         90        100        110        120 
KPAYINFTLE TLLKGYPTLL SKDAVVVEIL ETVQPGKRLL AIVKDLKEKG YTLALDDYIH 

       130        140        150        160        170        180 
QPVWRHFYPF IDIIKIDFLT CNIETIKTII DDLKPYPHLK LLAEKVETHE VYNQALELGF 

       190        200        210        220        230        240 
DYFQGFFFSK PEMIQSKALP PSGMTLAELL YETSTLDMDL KKITDIFERD VNLSYKLLRY 

       250        260        270        280        290        300 
SNSAAFARRA KISTIKQALI TLGANEIKKL LSLLFAAQVS TDKPMELIRL SLTRARFSEL 

       310        320        330        340        350        360 
LAISHGKFKD TGMVFLTGMM SLMDAILDES MQSVMQKLPL SNEIKAALLN DEGLLASYLN 

       370        380        390        400 
LVKFYEQGNW QAANQISQQL GLDDKVPDAY HEAISWVNEQ MQLMSNV 

« Hide

References

[1]"Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125."
Medigue C., Krin E., Pascal G., Barbe V., Bernsel A., Bertin P.N., Cheung F., Cruveiller S., D'Amico S., Duilio A., Fang G., Feller G., Ho C., Mangenot S., Marino G., Nilsson J., Parrilli E., Rocha E.P.C. expand/collapse author list , Rouy Z., Sekowska A., Tutino M.L., Vallenet D., von Heijne G., Danchin A.
Genome Res. 15:1325-1335(2005) [PubMed: 16169927] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR954246 Genomic DNA. Translation: CAI85913.1.
RefSeqYP_339356.1. NC_007481.1.

3D structure databases

ProteinModelPortalQ3IE28.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ3IE28.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID3708535.
GenomeReviewsGene locus PSHAa0832 in contig CR954246_GR.
KEGGpha:PSHAa0832.
NMPDRfig|326442.4.peg.1887.
PATRIC32295191. VBIPseHal105694_0794.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3434.
HOGENOMHBG537479.
OMARQPIFNR.
ProtClustDBCLSK757235.

Enzyme and pathway databases

BioCycPHAL326442:PSHAA0832-MONOMER.

Family and domain databases

InterProIPR014408. dGMP_Pdiesterase_EAL/HD-GYP.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR013976. HDOD.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
G3DSA:1.10.3150.10. HDOD. 1 hit.
KOK07181.
PfamPF00563. EAL. 1 hit.
PF08668. HDOD. 1 hit.
[Graphical view]
PIRSFPIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ3IE28_PSEHT
AccessionPrimary (citable) accession number: Q3IE28
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)