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Q3HWB9 (Q3HWB9_9HIV1) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:pol EMBL ABA71133.1
OrganismHuman immunodeficiency virus 1 EMBL ABA71133.1
Taxonomic identifier11676 [NCBI]
Taxonomic lineageVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostHomo sapiens (Human) [TaxID: 9606]

Protein attributes

Sequence length99 AA.
Sequence statusFragment.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains peptidase A2 domain. SAAS SAAS021109

Contains peptidase Adomain. SAAS SAAS021109

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL ABA71133.1
Non-terminal residue991 EMBL ABA71133.1

Sequences

Sequence LengthMass (Da)Tools
Q3HWB9 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 1887E9B42D82533D

FASTA9910,792
        10         20         30         40         50         60 
PQITLWQRPL VTIKIGGQLK EALLDTGADD TVLEEMNLPG RWKPKMIGGI GGFIKVRQYD 

        70         80         90 
QILIEICGHK AIGTVLVGPT PANIIGRNLL TQIGCTLNF 

« Hide

References

[1]"HIV-1 subtype C dissemination in southern Brazil."
Soares E.A.J.M., Martinez A.M.B., Souza T.M., Santos A.F.A., Da Hora V., Silveira J., Bastos F.I., Tanuri A., Soares M.A.
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B023PR EMBL ABA71133.1.
[2]"Characterization of a new circulating recombinant form comprising HIV-1 subtypes C and B in southern Brazil."
Santos A.F., Sousa T.M., Soares E.A., Sanabani S., Martinez A.M., Sprinz E., Silveira J., Sabino E.C., Tanuri A., Soares M.A.
AIDS 20:2011-2019(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B023PR EMBL ABA71133.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DQ190979 Genomic RNA. Translation: ABA71133.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.40.70.10. 1 hit.
InterProIPR001969. Aspartic_peptidase_AS.
IPR018061. Pept_A2A_retrovirus_sg.
IPR001995. Peptidase_A2_cat.
IPR021109. Peptidase_aspartic_dom.
[Graphical view]
PfamPF00077. RVP. 1 hit.
[Graphical view]
SUPFAMSSF50630. SSF50630. 1 hit.
PROSITEPS50175. ASP_PROT_RETROV. 1 hit.
PS00141. ASP_PROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ3HWB9_9HIV1
AccessionPrimary (citable) accession number: Q3HWB9
Entry history
Integrated into UniProtKB/TrEMBL: November 8, 2005
Last sequence update: November 8, 2005
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)