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Q3HWB9

- Q3HWB9_9HIV1

UniProt

Q3HWB9 - Q3HWB9_9HIV1

Protein
Submitted name:

Pol protein

Gene

pol

Organism
Human immunodeficiency virus 1
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. aspartic-type endopeptidase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Aspartyl proteaseUniRule annotation, Hydrolase, Protease

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pol proteinImported
    Gene namesi
    Name:polImported
    OrganismiHuman immunodeficiency virus 1Imported
    Taxonomic identifieri11676 [NCBI]
    Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
    Virus hostiHomo sapiens (Human) [TaxID: 9606]

    Family & Domainsi

    Sequence similaritiesi

    Contains peptidase A2 domain.SAAS annotation

    Family and domain databases

    Gene3Di2.40.70.10. 1 hit.
    InterProiIPR001969. Aspartic_peptidase_AS.
    IPR018061. Pept_A2A_retrovirus_sg.
    IPR001995. Peptidase_A2_cat.
    IPR021109. Peptidase_aspartic_dom.
    [Graphical view]
    PfamiPF00077. RVP. 1 hit.
    [Graphical view]
    SUPFAMiSSF50630. SSF50630. 1 hit.
    PROSITEiPS50175. ASP_PROT_RETROV. 1 hit.
    PS00141. ASP_PROTEASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q3HWB9-1 [UniParc]FASTAAdd to Basket

    « Hide

    PQITLWQRPL VTIKIGGQLK EALLDTGADD TVLEEMNLPG RWKPKMIGGI   50
    GGFIKVRQYD QILIEICGHK AIGTVLVGPT PANIIGRNLL TQIGCTLNF 99
    Length:99
    Mass (Da):10,792
    Last modified:November 8, 2005 - v1
    Checksum:i1887E9B42D82533D
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei1 – 11Imported
    Non-terminal residuei99 – 991Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ190979 Genomic RNA. Translation: ABA71133.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DQ190979 Genomic RNA. Translation: ABA71133.1 .

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 2.40.70.10. 1 hit.
    InterProi IPR001969. Aspartic_peptidase_AS.
    IPR018061. Pept_A2A_retrovirus_sg.
    IPR001995. Peptidase_A2_cat.
    IPR021109. Peptidase_aspartic_dom.
    [Graphical view ]
    Pfami PF00077. RVP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50630. SSF50630. 1 hit.
    PROSITEi PS50175. ASP_PROT_RETROV. 1 hit.
    PS00141. ASP_PROTEASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "HIV-1 subtype C dissemination in southern Brazil."
      Soares E.A.J.M., Martinez A.M.B., Souza T.M., Santos A.F.A., Da Hora V., Silveira J., Bastos F.I., Tanuri A., Soares M.A.
      Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: B023PRImported.
    2. "Characterization of a new circulating recombinant form comprising HIV-1 subtypes C and B in southern Brazil."
      Santos A.F., Sousa T.M., Soares E.A., Sanabani S., Martinez A.M., Sprinz E., Silveira J., Sabino E.C., Tanuri A., Soares M.A.
      AIDS 20:2011-2019(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: B023PRImported.

    Entry informationi

    Entry nameiQ3HWB9_9HIV1
    AccessioniPrimary (citable) accession number: Q3HWB9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 8, 2005
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)