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Q3EDJ0 (AB19I_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
ABC transporter I family member 19

Short name=ABC transporter ABCI.19
Short name=AtABCI19
Alternative name(s):
GCN-related protein 2
Non-intrinsic ABC protein 4
Gene names
Name:ABCI19
Synonyms:NAP4
Ordered Locus Names:At1g03905
ORF Names:F21M11.17
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length290 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Cytoplasm Ref.4.

Induction

By sucrose. Ref.4

Sequence similarities

Belongs to the ABC transporter superfamily. ABCI family.

Contains 1 ABC transporter domain.

Sequence caution

The sequence AAD10694.1 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At1g03900 has been split into 2 genes: At1g03900 and At1g03905.

Ontologies

Keywords
   Biological processTransport
   Cellular componentCytoplasm
   LigandATP-binding
Nucleotide-binding
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ATPase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 290290ABC transporter I family member 19
PRO_0000250656

Regions

Domain14 – 249236ABC transporter
Nucleotide binding47 – 548ATP Potential

Sequences

Sequence LengthMass (Da)Tools
Q3EDJ0 [UniParc].

Last modified November 8, 2005. Version 1.
Checksum: 1CCE64C1D5510D66

FASTA29032,421
        10         20         30         40         50         60 
MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL 

        70         80         90        100        110        120 
AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK TVGSAGEVPL QGDFSAEHMI 

       130        140        150        160        170        180 
FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD 

       190        200        210        220        230        240 
VVARMDLLEF FKEECDQRGA TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK 

       250        260        270        280        290 
TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"The Arabidopsis thaliana ABC protein superfamily, a complete inventory."
Sanchez-Fernandez R., Davies T.G., Coleman J.O., Rea P.A.
J. Biol. Chem. 276:30231-30244(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
[4]"Molecular characterization of three Arabidopsis soluble ABC proteins which expression is induced by sugars."
Marin E., Divol F., Bechtold N., Vavasseur A., Nussaume L., Forestier C.
Plant Sci. 171:84-90(2006) [AGRICOLA] [Europe PMC]
Cited for: INDUCTION, SUBCELLULAR LOCATION.
Strain: cv. Wassilewskija.
[5]"Plant ABC proteins - a unified nomenclature and updated inventory."
Verrier P.J., Bird D., Burla B., Dassa E., Forestier C., Geisler M., Klein M., Kolukisaoglu H.U., Lee Y., Martinoia E., Murphy A., Rea P.A., Samuels L., Schulz B., Spalding E.J., Yazaki K., Theodoulou F.L.
Trends Plant Sci. 13:151-159(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC003027 Genomic DNA. Translation: AAD10694.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE27631.1.
PIRG86169.
RefSeqNP_563694.1. NM_100271.3.
UniGeneAt.49849.

3D structure databases

ProteinModelPortalQ3EDJ0.
SMRQ3EDJ0. Positions 27-257.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT1G03905.1-P.

Proteomic databases

PaxDbQ3EDJ0.
PRIDEQ3EDJ0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G03905.1; AT1G03905.1; AT1G03905.
GeneID839376.
KEGGath:AT1G03905.

Organism-specific databases

TAIRAT1G03905.

Phylogenomic databases

eggNOGCOG4586.
HOGENOMHOG000200636.
InParanoidQ3EDJ0.
KOK12608.
OMACKKFEDI.
PhylomeDBQ3EDJ0.
ProtClustDBCLSN2916520.

Gene expression databases

GenevestigatorQ3EDJ0.

Family and domain databases

Gene3D3.40.50.300. 3 hits.
InterProIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
PROSITEPS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROQ3EDJ0.

Entry information

Entry nameAB19I_ARATH
AccessionPrimary (citable) accession number: Q3EDJ0
Secondary accession number(s): Q9ZWB0
Entry history
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: November 8, 2005
Last modified: April 16, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names