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Q3EDJ0

- AB19I_ARATH

UniProt

Q3EDJ0 - AB19I_ARATH

Protein

ABC transporter I family member 19

Gene

ABCI19

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (08 Nov 2005)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi47 – 548ATPPROSITE-ProRule annotation

    GO - Molecular functioni

    1. ATPase activity Source: InterPro
    2. ATP binding Source: UniProtKB-KW

    GO - Biological processi

    1. transport Source: UniProtKB-KW

    Keywords - Biological processi

    Transport

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    ABC transporter I family member 19
    Short name:
    ABC transporter ABCI.19
    Short name:
    AtABCI19
    Alternative name(s):
    GCN-related protein 2
    Non-intrinsic ABC protein 4
    Gene namesi
    Name:ABCI19
    Synonyms:NAP4
    Ordered Locus Names:At1g03905
    ORF Names:F21M11.17
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G03905.

    Subcellular locationi

    Cytoplasm 1 Publication

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 290290ABC transporter I family member 19PRO_0000250656Add
    BLAST

    Proteomic databases

    PaxDbiQ3EDJ0.
    PRIDEiQ3EDJ0.

    Expressioni

    Inductioni

    By sucrose.1 Publication

    Gene expression databases

    GenevestigatoriQ3EDJ0.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT1G03905.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ3EDJ0.
    SMRiQ3EDJ0. Positions 27-257.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini14 – 249236ABC transporterPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 ABC transporter domain.PROSITE-ProRule annotation

    Phylogenomic databases

    eggNOGiCOG4586.
    HOGENOMiHOG000200636.
    InParanoidiQ3EDJ0.
    KOiK12608.
    OMAiLDIDLQW.
    PhylomeDBiQ3EDJ0.

    Family and domain databases

    Gene3Di3.40.50.300. 3 hits.
    InterProiIPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR027417. P-loop_NTPase.
    [Graphical view]
    PfamiPF00005. ABC_tran. 1 hit.
    [Graphical view]
    SMARTiSM00382. AAA. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 1 hit.
    PROSITEiPS50893. ABC_TRANSPORTER_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q3EDJ0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG    50
    SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK 100
    TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS 150
    DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA 200
    TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE 250
    SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR 290
    Length:290
    Mass (Da):32,421
    Last modified:November 8, 2005 - v1
    Checksum:i1CCE64C1D5510D66
    GO

    Sequence cautioni

    The sequence AAD10694.1 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At1g03900 has been split into 2 genes: At1g03900 and At1g03905.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC003027 Genomic DNA. Translation: AAD10694.1. Sequence problems.
    CP002684 Genomic DNA. Translation: AEE27631.1.
    PIRiG86169.
    RefSeqiNP_563694.1. NM_100271.3.
    UniGeneiAt.49849.

    Genome annotation databases

    EnsemblPlantsiAT1G03905.1; AT1G03905.1; AT1G03905.
    GeneIDi839376.
    KEGGiath:AT1G03905.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC003027 Genomic DNA. Translation: AAD10694.1 . Sequence problems.
    CP002684 Genomic DNA. Translation: AEE27631.1 .
    PIRi G86169.
    RefSeqi NP_563694.1. NM_100271.3.
    UniGenei At.49849.

    3D structure databases

    ProteinModelPortali Q3EDJ0.
    SMRi Q3EDJ0. Positions 27-257.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT1G03905.1-P.

    Proteomic databases

    PaxDbi Q3EDJ0.
    PRIDEi Q3EDJ0.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G03905.1 ; AT1G03905.1 ; AT1G03905 .
    GeneIDi 839376.
    KEGGi ath:AT1G03905.

    Organism-specific databases

    TAIRi AT1G03905.

    Phylogenomic databases

    eggNOGi COG4586.
    HOGENOMi HOG000200636.
    InParanoidi Q3EDJ0.
    KOi K12608.
    OMAi LDIDLQW.
    PhylomeDBi Q3EDJ0.

    Miscellaneous databases

    PROi Q3EDJ0.

    Gene expression databases

    Genevestigatori Q3EDJ0.

    Family and domain databases

    Gene3Di 3.40.50.300. 3 hits.
    InterProi IPR003593. AAA+_ATPase.
    IPR003439. ABC_transporter-like.
    IPR027417. P-loop_NTPase.
    [Graphical view ]
    Pfami PF00005. ABC_tran. 1 hit.
    [Graphical view ]
    SMARTi SM00382. AAA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 1 hit.
    PROSITEi PS50893. ABC_TRANSPORTER_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "The Arabidopsis thaliana ABC protein superfamily, a complete inventory."
      Sanchez-Fernandez R., Davies T.G., Coleman J.O., Rea P.A.
      J. Biol. Chem. 276:30231-30244(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.
    4. "Molecular characterization of three Arabidopsis soluble ABC proteins which expression is induced by sugars."
      Marin E., Divol F., Bechtold N., Vavasseur A., Nussaume L., Forestier C.
      Plant Sci. 171:84-90(2006)
      [AGRICOLA] [Europe PMC]
      Cited for: INDUCTION, SUBCELLULAR LOCATION.
      Strain: cv. Wassilewskija.
    5. Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiAB19I_ARATH
    AccessioniPrimary (citable) accession number: Q3EDJ0
    Secondary accession number(s): Q9ZWB0
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 3, 2006
    Last sequence update: November 8, 2005
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3