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Protein

ABC transporter I family member 19

Gene

ABCI19

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi47 – 548ATPPROSITE-ProRule annotation

GO - Molecular functioni

  1. ATPase activity Source: InterPro
  2. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. transport Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transport

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter I family member 19
Short name:
ABC transporter ABCI.19
Short name:
AtABCI19
Alternative name(s):
GCN-related protein 2
Non-intrinsic ABC protein 4
Gene namesi
Name:ABCI19
Synonyms:NAP4
Ordered Locus Names:At1g03905
ORF Names:F21M11.17
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G03905.

Subcellular locationi

Cytoplasm 1 Publication

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 290290ABC transporter I family member 19PRO_0000250656Add
BLAST

Proteomic databases

PaxDbiQ3EDJ0.
PRIDEiQ3EDJ0.

Expressioni

Inductioni

By sucrose.1 Publication

Gene expression databases

GenevestigatoriQ3EDJ0.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G03905.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ3EDJ0.
SMRiQ3EDJ0. Positions 27-257.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 249236ABC transporterPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ABC transporter domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG4586.
HOGENOMiHOG000200636.
InParanoidiQ3EDJ0.
KOiK12608.
OMAiGNGDEGW.
PhylomeDBiQ3EDJ0.

Family and domain databases

Gene3Di3.40.50.300. 3 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q3EDJ0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG
60 70 80 90 100
SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
110 120 130 140 150
TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS
160 170 180 190 200
DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
210 220 230 240 250
TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE
260 270 280 290
SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
Length:290
Mass (Da):32,421
Last modified:November 8, 2005 - v1
Checksum:i1CCE64C1D5510D66
GO

Sequence cautioni

The sequence AAD10694.1 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At1g03900 has been split into 2 genes: At1g03900 and At1g03905.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003027 Genomic DNA. Translation: AAD10694.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE27631.1.
PIRiG86169.
RefSeqiNP_563694.1. NM_100271.3.
UniGeneiAt.49849.

Genome annotation databases

EnsemblPlantsiAT1G03905.1; AT1G03905.1; AT1G03905.
GeneIDi839376.
KEGGiath:AT1G03905.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC003027 Genomic DNA. Translation: AAD10694.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE27631.1.
PIRiG86169.
RefSeqiNP_563694.1. NM_100271.3.
UniGeneiAt.49849.

3D structure databases

ProteinModelPortaliQ3EDJ0.
SMRiQ3EDJ0. Positions 27-257.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G03905.1-P.

Proteomic databases

PaxDbiQ3EDJ0.
PRIDEiQ3EDJ0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G03905.1; AT1G03905.1; AT1G03905.
GeneIDi839376.
KEGGiath:AT1G03905.

Organism-specific databases

TAIRiAT1G03905.

Phylogenomic databases

eggNOGiCOG4586.
HOGENOMiHOG000200636.
InParanoidiQ3EDJ0.
KOiK12608.
OMAiGNGDEGW.
PhylomeDBiQ3EDJ0.

Miscellaneous databases

PROiQ3EDJ0.

Gene expression databases

GenevestigatoriQ3EDJ0.

Family and domain databases

Gene3Di3.40.50.300. 3 hits.
InterProiIPR003593. AAA+_ATPase.
IPR003439. ABC_transporter-like.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "The Arabidopsis thaliana ABC protein superfamily, a complete inventory."
    Sanchez-Fernandez R., Davies T.G., Coleman J.O., Rea P.A.
    J. Biol. Chem. 276:30231-30244(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.
  4. "Molecular characterization of three Arabidopsis soluble ABC proteins which expression is induced by sugars."
    Marin E., Divol F., Bechtold N., Vavasseur A., Nussaume L., Forestier C.
    Plant Sci. 171:84-90(2006)
    [AGRICOLA] [Europe PMC]
    Cited for: INDUCTION, SUBCELLULAR LOCATION.
    Strain: cv. Wassilewskija.
  5. Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiAB19I_ARATH
AccessioniPrimary (citable) accession number: Q3EDJ0
Secondary accession number(s): Q9ZWB0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: November 8, 2005
Last modified: January 7, 2015
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.